RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TIMM22Q9Y584 194 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 PCM1Q15154 2024 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 ACACAQ13085 2346 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 AHCTF1Q8WYP5 2266 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 MANBAO00462 879 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 UBFD1O14562 309 aaKnown RBP13.17□□□□□ -0.3
CCM2-217ENST00000492883 PCDH17O14917 1159 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 TM9SF1O15321 606 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 SNRNP200O75643 2136 aaKnown RBP13.17□□□□□ -0.3
CCM2-217ENST00000492883 ZWINTO95229 277 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 ETHE1O95571 254 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 BPGMP07738 259 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 FAM87AP0C7U9 286 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 H2AFXP16104 143 aaPredicted RBP13.17□□□□□ -0.3
CCM2-217ENST00000492883 TSFMP43897 325 aaKnown RBP13.17□□□□□ -0.3
CCM2-217ENST00000492883 LIM2P55344 173 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 RAB38P57729 211 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 SLAMF1Q13291 335 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 NSDHLQ15738 373 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 TCHHL1Q5QJ38 904 aaPredicted RBP13.17□□□□□ -0.3
CCM2-217ENST00000492883 DCAF10Q5QP82 559 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 CPZQ66K79 652 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 ZNF793Q6ZN11 406 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 NUDCD3Q8IVD9 361 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 CLEC1AQ8NC01 280 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 OR11G2Q8NGC1 345 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 PPP1R14CQ8TAE6 165 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 AGAP11Q8TF27 550 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 WBP1Q96G27 269 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 KCNA7Q96RP8 456 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 SLC29A3Q9BZD2 475 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 SHCBP1LQ9BZQ2 653 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 ATP13A2Q9NQ11 1180 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 LANCL2Q9NS86 450 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 C19orf25Q9UFG5 118 aaPredicted RBP13.17□□□□□ -0.3
CCM2-217ENST00000492883 FBXL4Q9UKA2 621 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 PPT2Q9UMR5 302 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 DAPP1Q9UN19 280 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 SPACA6W5XKT8 324 aa13.17□□□□□ -0.3
CCM2-217ENST00000492883 WDR91A4D1P6 747 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 A6NL46 340 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 CLDN4O14493 209 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 PLPP1O14494 284 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 ATXN7O15265 892 aaPredicted RBP13.16□□□□□ -0.3
CCM2-217ENST00000492883 PRMT3O60678 531 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 DNAJB5O75953 348 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 SEMA3DO95025 777 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 CYC1P08574 325 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 NEFHP12036 1026 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 ETV4P43268 484 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 ARFIP1P53367 373 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 MAGOHP61326 146 aaKnown RBP13.16□□□□□ -0.3
CCM2-217ENST00000492883 BTG2P78543 158 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 EEF1A2Q05639 463 aaKnown RBP13.16□□□□□ -0.3
CCM2-217ENST00000492883 ACTN3Q08043 901 aaPredicted RBP13.16□□□□□ -0.3
CCM2-217ENST00000492883 ABRAXAS2Q15018 415 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 FAM219BQ5XKK7 198 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 CYP20A1Q6UW02 462 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 TMEM205Q6UW68 189 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 ANKRD42Q8N9B4 389 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 PLPP5Q8NEB5 264 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 ADAMTS18Q8TE60 1221 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 PTCHD1Q96NR3 888 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 HBEGFQ99075 208 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 MESP1Q9BRJ9 268 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 TRMOQ9BU70 441 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 BRF2Q9HAW0 419 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 EML4Q9HC35 981 aaKnown RBP13.16□□□□□ -0.3
CCM2-217ENST00000492883 LYRM4Q9HD34 91 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 PRTFDC1Q9NRG1 225 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 RALYQ9UKM9 306 aaKnown RBP13.16□□□□□ -0.3
CCM2-217ENST00000492883 FBXW2Q9UKT8 454 aa13.16□□□□□ -0.3
CCM2-217ENST00000492883 G3BP2Q9UN86 482 aaKnown RBP13.16□□□□□ -0.3
CCM2-217ENST00000492883 MRPS33Q9Y291 106 aaKnown RBP13.16□□□□□ -0.3
CCM2-217ENST00000492883 MAP1BP46821 2468 aaKnown RBP13.16□□□□□ -0.3
CCM2-217ENST00000492883 NSG1A0A0A6YYJ2 146 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 ARHGAP10A1A4S6 786 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 MKRN2OSH3BPM6 223 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 MASP2O00187 686 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 NPHS1O60500 1241 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 SCELO95171 688 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 HPP00738 406 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 SFTPCP11686 197 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 CPN2P22792 545 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 SERPINB3P29508 390 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 BSGP35613 385 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 SERPINB4P48594 390 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 EFNA3P52797 238 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 FOXA1P55317 472 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 RHAGQ02094 409 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 ZNF33BQ06732 778 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 AIMP2Q13155 320 aaKnown RBP13.15□□□□□ -0.3
CCM2-217ENST00000492883 SLC13A2Q13183 592 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 KCNAB2Q13303 367 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 LY6DQ14210 128 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 SCIMPQ6UWF3 145 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 ZCCHC23Q6ZST2 131 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 LANCL3Q6ZV70 420 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 NDUFAF7Q7L592 441 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms