RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 H3BMQ9 156 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 CLOCKO15516 846 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 KLK10O43240 276 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 TPST1O60507 370 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ATP6V1G1O75348 118 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 PSIP1O75475 530 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 RASAL1O95294 804 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 TIAF1O95411 115 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ALDOCP09972 364 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ZNF12P17014 697 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 CDH3P22223 829 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 RAB28P51157 221 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 NFKB2Q00653 900 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 TLE3Q04726 772 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ATP6AP1Q15904 470 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ZIC1Q15915 447 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 COQ5Q5HYK3 327 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ZNF678Q5SXM1 525 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 DCAF12Q5T6F0 453 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 HECTD2Q5U5R9 776 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 PAQR3Q6TCH7 311 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 SPESP1Q6UW49 350 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 RPS27LQ71UM5 84 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 TIPARPQ7Z3E1 657 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 RETREG3Q86VR2 466 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 SLC15A3Q8IY34 581 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 D2HGDHQ8N465 521 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 DHRSXQ8N5I4 330 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 TRPV3Q8NET8 790 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 PNPT1Q8TCS8 783 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 EEF1AKMT1Q8WVE0 214 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 CYGBQ8WWM9 190 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 COG8Q96MW5 612 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 YTHDF1Q9BYJ9 559 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 B3GNT4Q9C0J1 378 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 PAIP1Q9H074 479 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 RPF2Q9H7B2 306 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 C1GALT1Q9NS00 363 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 SMPD3Q9NY59 655 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 OR6C2Q9NZP2 312 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 KLHL42Q9P2K6 505 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 EGFL7Q9UHF1 273 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 OAZ3Q9UMX2 235 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 NBEAQ8NFP9 2946 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ANKRD12Q6UB98 2062 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 UBFD1O14562 309 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 POLR1CO15160 346 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 RRP8O43159 456 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 EFSO43281 561 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 HCRTR1O43613 425 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 PRICKLE3O43900 615 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 VPS26AO75436 327 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ZBTB11O95625 1053 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 MPC1LP0DKB6 136 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 CD9P21926 228 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 FDXRP22570 491 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 NAA20P61599 178 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 HERVK_113P63132 956 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 HSD11B2P80365 405 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 RPS6KA2Q15349 733 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 GPR19Q15760 415 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 COL28A1Q2UY09 1125 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 TMEM164Q5U3C3 297 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 TMEM207Q6UWW9 146 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 NEK10Q6ZWH5 1172 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 OR2L8Q8NGY9 312 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ASB11Q8WXH4 323 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 RAD51AP1Q96B01 352 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 TUBA1CQ9BQE3 449 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ERVK-6Q9BXR3 956 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 ALG9Q9H6U8 611 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 AKTIPQ9H8T0 292 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 IL1RL2Q9HB29 575 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 FAM60AQ9NP50 221 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 MAP10Q9P2G4 905 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 PAIP2BQ9ULR5 123 aaKnown RBP8.98□□□□□ -0.97
BRCA1-219ENST00000491747 BTRCQ9Y297 605 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 KLHL20Q9Y2M5 609 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 VWA7Q9Y334 891 aa8.98□□□□□ -0.97
BRCA1-219ENST00000491747 A0A1W2PPV9 198 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 ISM1B1AKI9 464 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-219ENST00000491747 GFYI3L273 518 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 ATE1O95260 518 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 TSPAN12O95859 305 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 RPN2P04844 631 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 FGF4P08620 206 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 FGF5P12034 268 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 PORP16435 677 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-219ENST00000491747 PSMB5P28074 263 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 CAPGP40121 348 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 YBX1P67809 324 aaKnown RBP8.97□□□□□ -0.97
BRCA1-219ENST00000491747 ILF2Q12905 390 aaKnown RBP8.97□□□□□ -0.97
BRCA1-219ENST00000491747 PMS2P3Q13401 168 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 RAB39AQ14964 217 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 CYP51A1Q16850 503 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 TTLL9Q3SXZ7 439 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 VPS26BQ4G0F5 336 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 GPR107Q5VW38 600 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 CEACAM20Q6UY09 585 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms