RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 HSF1Q00613 529 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 OR4D1Q15615 310 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 XKR6Q5GH73 641 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 SULT1C3Q6IMI6 304 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 ADNP2Q6IQ32 1131 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 ZNF227Q86WZ6 799 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 SIAH3Q8IW03 269 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 CTAGE3PQ8IX95 158 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 GHDCQ8N2G8 530 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 APCDD1LQ8NCL9 501 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 OR2L5Q8NG80 312 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 SEC16BQ96JE7 1060 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 NT5DC2Q9H857 520 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 COPS7BQ9H9Q2 264 aaPredicted RBP17.17■□□□□ 0.34
SMIM4-205ENST00000491607 WHRNQ9P202 907 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 MRPS33Q9Y291 106 aaKnown RBP17.17■□□□□ 0.34
SMIM4-205ENST00000491607 ZNF835Q9Y2P0 537 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 CENPEQ02224 2701 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 DIDO1Q9BTC0 2240 aaKnown RBP17.16■□□□□ 0.34
SMIM4-205ENST00000491607 FAM187AA6NFU0 413 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 EIF3HO15372 352 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMIM4-205ENST00000491607 STK16O75716 305 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 CD1DP15813 335 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 CERS1P27544 350 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 PPP2R1BP30154 601 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 GGT5P36269 586 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 GP5P40197 560 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 HNRNPFP52597 415 aaKnown RBP17.16■□□□□ 0.34
SMIM4-205ENST00000491607 SMSP52788 366 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 ADORA2A-AS1P86434 159 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 CBLBQ13191 982 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 TERF2Q15554 542 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 PDK4Q16654 411 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 XKRXQ6PP77 449 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 C3orf62Q6ZUJ4 267 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 MAATS1Q7Z4T9 603 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 CLNKQ7Z7G1 428 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 SCUBE1Q8IWY4 988 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 TMEM156Q8N614 296 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 TMEM52Q8NDY8 209 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 ADAMTS18Q8TE60 1221 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 VMP1Q96GC9 406 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 SERINC2Q96SA4 455 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 GPR22Q99680 433 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 CCDC77Q9BR77 488 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 PITHD1Q9GZP4 211 aaPredicted RBP17.16■□□□□ 0.34
SMIM4-205ENST00000491607 EHD1Q9H4M9 534 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 TRIM45Q9H8W5 580 aaPredicted RBP17.16■□□□□ 0.34
SMIM4-205ENST00000491607 CHST11Q9NPF2 352 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 RNF112Q9ULX5 631 aa17.16■□□□□ 0.34
SMIM4-205ENST00000491607 KLF13Q9Y2Y9 288 aaPredicted RBP17.16■□□□□ 0.34
SMIM4-205ENST00000491607 ITPR2Q14571 2701 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 TGFBR3LH3BV60 316 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 RAD51CO43502 376 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 CCNT2O60583 730 aaKnown RBP17.15■□□□□ 0.34
SMIM4-205ENST00000491607 ITGA10O75578 1167 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 SNRPB2P08579 225 aaKnown RBP17.15■□□□□ 0.34
SMIM4-205ENST00000491607 MEOX1P50221 254 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 MTTPP55157 894 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 RAB10P61026 200 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 C2orf54Q08AI8 447 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 DOC2AQ14183 400 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 ZNF630Q2M218 657 aaPredicted RBP17.15■□□□□ 0.34
SMIM4-205ENST00000491607 RNFT1Q5M7Z0 435 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 CDKL4Q5MAI5 379 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 Q6ZPB1 254 aaPredicted RBP17.15■□□□□ 0.34
SMIM4-205ENST00000491607 VN1R5Q7Z5H4 357 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 ZNF595Q8IYB9 648 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 CYP4Z2PQ8N1L4 340 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 SPATA4Q8NEY3 305 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 NCLNQ969V3 563 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 PTCD3Q96EY7 689 aaKnown RBP17.15■□□□□ 0.34
SMIM4-205ENST00000491607 QRFPRQ96P65 431 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 ZNF490Q9ULM2 529 aaPredicted RBP17.15■□□□□ 0.34
SMIM4-205ENST00000491607 MEMO1Q9Y316 297 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 CACNA1DQ01668 2161 aa17.15■□□□□ 0.34
SMIM4-205ENST00000491607 FAM159BA6NKW6 160 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 TFECO14948 347 aaPredicted RBP17.14■□□□□ 0.33
SMIM4-205ENST00000491607 PRAMEF4O60810 478 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 TBX6O95947 436 aaPredicted RBP17.14■□□□□ 0.33
SMIM4-205ENST00000491607 IFNA16P05015 189 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 RFC3P40938 356 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 LIM2P55344 173 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 TGM3Q08188 693 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 BMPR2Q13873 1038 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 RCN2Q14257 317 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 SLMAPQ14BN4 828 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 ZKSCAN8Q15776 578 aaPredicted RBP17.14■□□□□ 0.33
SMIM4-205ENST00000491607 HIST2H2ACQ16777 129 aaPredicted RBP17.14■□□□□ 0.33
SMIM4-205ENST00000491607 ADPRMQ3LIE5 342 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 PAGE2BQ5JRK9 111 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 PRAMEF9Q5VWM5 478 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 HIST2H2AA3Q6FI13 130 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 ABHD17CQ6PCB6 329 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 RAPH1Q70E73 1250 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 CCDC25Q86WR0 208 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 SULF2Q8IWU5 870 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 ARMC10Q8N2F6 343 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 PDPRQ8NCN5 879 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 AGAP11Q8TF27 550 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms