RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 INPP4BO15327 924 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 NME6O75414 186 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-206ENST00000489868 RENP00797 406 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 MELTFP08582 738 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 GP9P14770 177 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 FCGR2BP31994 310 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-206ENST00000489868 FCGR2CP31995 323 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 CRYBA2P53672 197 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 FKBP1BP68106 108 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 GPR50Q13585 617 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 TWISTNBQ3B726 338 aaPredicted RBP4.03□□□□□ -1.76
CCDC39-206ENST00000489868 PLPP4Q5VZY2 271 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 SEL1L3Q68CR1 1132 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 NHLRC1Q6VVB1 395 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 PHLDB2Q86SQ0 1253 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 SIX6OS1Q8N1H7 587 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 C4orf32Q8N8J7 132 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 NHLRC2Q8NBF2 726 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 DEPDC1BQ8WUY9 529 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 FAM120CQ9NX05 1096 aaKnown RBP4.03□□□□□ -1.76
CCDC39-206ENST00000489868 GPR83Q9NYM4 423 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 UBQLN2Q9UHD9 624 aa4.03□□□□□ -1.76
CCDC39-206ENST00000489868 FER1L5A0AVI2 2057 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 PFASO15067 1338 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 ZNF840PA6NDX5 716 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 KBTBD13C9JR72 458 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 SCO2O43819 266 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 SEMA4FO95754 770 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 SCG2P13521 617 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 CCND3P30281 292 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-206ENST00000489868 SLC1A3P43003 542 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 NPBWR1P48145 328 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 CETN1Q12798 172 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 PSMD6Q15008 389 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 C3AR1Q16581 482 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 LEMD1Q68G75 181 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 NEPROQ6NW34 567 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 PET117Q6UWS5 81 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 CATSPER3Q86XQ3 398 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 FGFRL1Q8N441 504 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 SUMF1Q8NBK3 374 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 CSNK1G2-AS1Q8NCQ2 148 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 KIAA0895Q8NCT3 520 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 LIPHQ8WWY8 451 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 FAM162AQ96A26 154 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 PINK1Q9BXM7 581 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 MOB1AQ9H8S9 216 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 KCNK13Q9HB14 408 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 PLEKHA3Q9HB20 300 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 PDRG1Q9NUG6 133 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 SLCO1C1Q9NYB5 712 aa4.02□□□□□ -1.77
CCDC39-206ENST00000489868 GON4LQ3T8J9 2241 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 TCP10L2B9ZVM9 353 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 OGTO15294 1046 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 GPRIN2O60269 458 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 ZNF354AO60765 605 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-206ENST00000489868 HPP00738 406 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 HSP90AA1P07900 732 aaKnown RBP4.01□□□□□ -1.77
CCDC39-206ENST00000489868 GJB2P29033 226 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 ACY1Q03154 408 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 PTK6Q13882 451 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 CEACAM7Q14002 265 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 TMEM99Q8N816 258 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 GPR148Q8TDV2 347 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 ALKBH3Q96Q83 286 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-206ENST00000489868 TNFRSF13CQ96RJ3 184 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 RASL10BQ96S79 203 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 PARK7Q99497 189 aaKnown RBP4.01□□□□□ -1.77
CCDC39-206ENST00000489868 HNRNPABQ99729 332 aaKnown RBP4.01□□□□□ -1.77
CCDC39-206ENST00000489868 UBAC1Q9BSL1 405 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 THUMPD3Q9BV44 507 aaKnown RBP4.01□□□□□ -1.77
CCDC39-206ENST00000489868 MTIF3Q9H2K0 278 aaKnown RBP4.01□□□□□ -1.77
CCDC39-206ENST00000489868 DEPPQ9NTK1 212 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 TP53TG3Q9ULZ0 132 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 SH3GLB1Q9Y371 365 aa4.01□□□□□ -1.77
CCDC39-206ENST00000489868 A0A087WWV3 80 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 LOC390937A0A1W2PQ73 354 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 CCDC162PA2VCL2 907 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 PHOX2AO14813 284 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 IFIT3O14879 490 aaKnown RBP4□□□□□ -1.77
CCDC39-206ENST00000489868 TXNL1O43396 289 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 B4GAT1O43505 415 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 TBCAO75347 108 aaKnown RBP4□□□□□ -1.77
CCDC39-206ENST00000489868 VENTXO95231 258 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 FGF19O95750 216 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 SUPT20HL2P0C7V6 817 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 CASTP20810 708 aaKnown RBP4□□□□□ -1.77
CCDC39-206ENST00000489868 IER3P46695 156 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 RPS27AP62979 156 aaKnown RBP4□□□□□ -1.77
CCDC39-206ENST00000489868 RBP5P82980 135 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 SCN1BQ07699 218 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 POM121L1PQ3SYA9 428 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 IQCCQ4KMZ1 466 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 ZNF776Q68DI1 518 aaPredicted RBP4□□□□□ -1.77
CCDC39-206ENST00000489868 CASC4Q6P4E1 433 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 SIGLEC15Q6ZMC9 328 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 AQP12AQ8IXF9 295 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 ZNRF1Q8ND25 227 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms