RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 MYLK4Q86YV6 388 aaPredicted RBP16.73■□□□□ 0.27
ABCF3-217ENST00000489719 BCORP1Q8N888 145 aa16.73■□□□□ 0.27
ABCF3-217ENST00000489719 SCYL1Q96KG9 808 aa16.73■□□□□ 0.27
ABCF3-217ENST00000489719 QRFPRQ96P65 431 aa16.73■□□□□ 0.27
ABCF3-217ENST00000489719 GPR78Q96P69 363 aa16.73■□□□□ 0.27
ABCF3-217ENST00000489719 KCNC2Q96PR1 638 aa16.73■□□□□ 0.27
ABCF3-217ENST00000489719 NECTIN3Q9NQS3 549 aa16.73■□□□□ 0.27
ABCF3-217ENST00000489719 PRTFDC1Q9NRG1 225 aa16.73■□□□□ 0.27
ABCF3-217ENST00000489719 CPSF2Q9P2I0 782 aaKnown RBP16.73■□□□□ 0.27
ABCF3-217ENST00000489719 ADGRE2Q9UHX3 823 aa16.73■□□□□ 0.27
ABCF3-217ENST00000489719 NFU1Q9UMS0 254 aa16.73■□□□□ 0.27
ABCF3-217ENST00000489719 SCN3AQ9NY46 2000 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 TCRBV16S1A1N1A0A5B0 115 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 PRAMEF2O60811 474 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 TBX6O95947 436 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-217ENST00000489719 TGFB1P01137 390 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 HSD17B7P56937 341 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 E2F2Q14209 437 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 NAA30Q147X3 362 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-217ENST00000489719 AP5B1Q2VPB7 878 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 LIPJQ5W064 366 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 ADNP2Q6IQ32 1131 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 RPS19BP1Q86WX3 136 aaKnown RBP16.72■□□□□ 0.27
ABCF3-217ENST00000489719 CRLF3Q8IUI8 442 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 ZNF595Q8IYB9 648 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 LAS2Q8IYD9 372 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 BEST3Q8N1M1 668 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 ST6GALNAC3Q8NDV1 305 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 OR7G3Q8NG95 312 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 ZNF473Q8WTR7 871 aaKnown RBP16.72■□□□□ 0.27
ABCF3-217ENST00000489719 CMTM7Q96FZ5 175 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 UTP23Q9BRU9 249 aaKnown RBP16.72■□□□□ 0.27
ABCF3-217ENST00000489719 TBCDQ9BTW9 1192 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 CDCP1Q9H5V8 836 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 ACTR8Q9H981 624 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 PRDM7Q9NQW5 492 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 ZNF180Q9UJW8 692 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 PCDHGA11Q9Y5H2 935 aa16.72■□□□□ 0.27
ABCF3-217ENST00000489719 IGKV3D-11A0A0A0MRZ8 115 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 SAGE2PA6NJ88 616 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 KLK8O60259 260 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 RASAL1O95294 804 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 SNRPAP09012 282 aaKnown RBP16.71■□□□□ 0.27
ABCF3-217ENST00000489719 COL6A2P12110 1019 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 PIK3CGP48736 1102 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 LIM2P55344 173 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 PCBP2Q15366 365 aaKnown RBP eCLIP16.71■□□□□ 0.27
ABCF3-217ENST00000489719 INAQ16352 499 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 TSNAXIP1Q2TAA8 658 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 GRHL2Q6ISB3 625 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 METTL2BQ6P1Q9 378 aaKnown RBP16.71■□□□□ 0.27
ABCF3-217ENST00000489719 TRMT10CQ7L0Y3 403 aaKnown RBP16.71■□□□□ 0.27
ABCF3-217ENST00000489719 PLD6Q8N2A8 252 aaKnown RBP16.71■□□□□ 0.27
ABCF3-217ENST00000489719 ELP5Q8TE02 316 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 ATP6V1E2Q96A05 226 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 CENPKQ9BS16 269 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 MS4A8Q9BY19 250 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 IPPKQ9H8X2 491 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 ASH1LQ9NR48 2969 aaKnown RBP16.71■□□□□ 0.27
ABCF3-217ENST00000489719 PNO1Q9NRX1 252 aaKnown RBP16.71■□□□□ 0.27
ABCF3-217ENST00000489719 OLAHQ9NV23 265 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 TMCO1Q9UM00 188 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 DAPP1Q9UN19 280 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 SPACA6W5XKT8 324 aa16.71■□□□□ 0.27
ABCF3-217ENST00000489719 PRRC2CQ9Y520 2896 aaKnown RBP16.7■□□□□ 0.26
ABCF3-217ENST00000489719 EXOC1LA0A1B0GW35 172 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 BLACEA4D250 179 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 TRIM49D1C9J1S8 452 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 CTNSO60931 367 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 SMIM24O75264 130 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 SEMA7AO75326 666 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 SH3BGRLO75368 114 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 RHOXF2BP0C7M4 288 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 EDN3P14138 238 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 CERS1P27544 350 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 CD96P40200 585 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 PHEXP78562 749 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 OC90Q02509 493 aaPredicted RBP16.7■□□□□ 0.26
ABCF3-217ENST00000489719 DDX39BQ13838 428 aaKnown RBP16.7■□□□□ 0.26
ABCF3-217ENST00000489719 GTF2H2Q13888 395 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 ZNF766Q5HY98 468 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 DEPDC1Q5TB30 811 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 GTF2H2CQ6P1K8 395 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 HORMAD2Q8N7B1 307 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 FAM47BQ8NA70 645 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 SSC4DQ8WTU2 575 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 DCAKDQ8WVC6 231 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 ISL2Q96A47 359 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 REPS1Q96D71 796 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 PHF21BQ96EK2 531 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 RHOXF2Q9BQY4 288 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 DEFB126Q9BYW3 111 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 LYRM4Q9HD34 91 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 ZNF358Q9NW07 568 aa16.7■□□□□ 0.26
ABCF3-217ENST00000489719 RP1L1Q8IWN7 2480 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-217ENST00000489719 SYNDIG1LA6NDD5 238 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 LRRC14BA6NHZ5 514 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 GABRR3A8MPY1 467 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 CYR61O00622 381 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 CDK2AP1O14519 115 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms