RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 MRPS2Q9Y399 296 aaKnown RBP19.83■□□□□ 0.76
SND1-214ENST00000489417 PIM1P11309 404 aaPredicted RBP19.82■□□□□ 0.76
SND1-214ENST00000489417 CD59P13987 128 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 CORO7P57737 925 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 SNRPNP63162 240 aaKnown RBP19.82■□□□□ 0.76
SND1-214ENST00000489417 PHC1P78364 1004 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 MAPKAPK3Q16644 382 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 TMTC4Q5T4D3 741 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 OR4F3Q6IEY1 312 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 ANKRD26P1Q6NSI1 321 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 ZNF574Q6ZN55 896 aaPredicted RBP19.82■□□□□ 0.76
SND1-214ENST00000489417 TMPRSS9Q7Z410 1059 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 GPR180Q86V85 440 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 D2HGDHQ8N465 521 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 OR4D9Q8NGE8 314 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 OR8J2Q8NGG1 315 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 PPCDCQ96CD2 204 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 COQ8BQ96D53 544 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 RAB3IPQ96QF0 476 aaPredicted RBP19.82■□□□□ 0.76
SND1-214ENST00000489417 SERINC2Q96SA4 455 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 DUSP26Q9BV47 211 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 IRF2BPLQ9H1B7 796 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 TMEM9BQ9NQ34 198 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 PDP2Q9P2J9 529 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 SLC22A7Q9Y694 548 aa19.82■□□□□ 0.76
SND1-214ENST00000489417 LAMA1P25391 3075 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 GUCY1B2O75343 617 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 LAMP1P11279 417 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 NELFEP18615 380 aaKnown RBP19.81■□□□□ 0.76
SND1-214ENST00000489417 PGM1P36871 562 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 PSME3P61289 254 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 KCNAB1Q14722 419 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 HEPACAMQ14CZ8 416 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 CSRP2Q16527 193 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 TRMT5Q32P41 509 aaKnown RBP19.81■□□□□ 0.76
SND1-214ENST00000489417 DEFB134Q4QY38 66 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 TCTE1Q5JU00 501 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 ARHGAP24Q8N264 748 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 UTP4Q969X6 686 aaKnown RBP19.81■□□□□ 0.76
SND1-214ENST00000489417 FAIM2Q9BWQ8 316 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 RMND5AQ9H871 391 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 IL1RL2Q9HB29 575 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 RXFP3Q9NSD7 469 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 ATAD3AQ9NVI7 634 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 FAM120CQ9NX05 1096 aaKnown RBP19.81■□□□□ 0.76
SND1-214ENST00000489417 TEX10Q9NXF1 929 aaPredicted RBP19.81■□□□□ 0.76
SND1-214ENST00000489417 SH3BP4Q9P0V3 963 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 ASB4Q9Y574 426 aa19.81■□□□□ 0.76
SND1-214ENST00000489417 COL5A1P20908 1838 aaPredicted RBP19.8■□□□□ 0.76
SND1-214ENST00000489417 FXYD1O00168 92 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 B3GALT2O43825 422 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 TBX19O60806 448 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 LRP3O75074 770 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 ANKRD34CP0C6C1 535 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 DDCP20711 480 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 ACP1P24666 158 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 WNT3P56703 355 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 NDUFA9Q16795 377 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 ZNF385BQ569K4 471 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 C8orf82Q6P1X6 216 aaPredicted RBP19.8■□□□□ 0.76
SND1-214ENST00000489417 DHDDSQ86SQ9 333 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 TICAM1Q8IUC6 712 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 MMP21Q8N119 569 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 ARHGEF39Q8N4T4 335 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 GTF2H4Q92759 462 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 LRRC58Q96CX6 371 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 ITCHQ96J02 903 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 GFM1Q96RP9 751 aaKnown RBP19.8■□□□□ 0.76
SND1-214ENST00000489417 THTPAQ9BU02 230 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 BHLHE41Q9C0J9 482 aaPredicted RBP19.8■□□□□ 0.76
SND1-214ENST00000489417 MIEF1Q9NQG6 463 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 FAM86C1Q9NVL1 165 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 IRAK4Q9NWZ3 460 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 FBXW2Q9UKT8 454 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 PRPF19Q9UMS4 504 aaKnown RBP19.8■□□□□ 0.76
SND1-214ENST00000489417 MAN2B2Q9Y2E5 1009 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 PCDHGA7Q9Y5G6 932 aa19.8■□□□□ 0.76
SND1-214ENST00000489417 GALR3O60755 368 aaPredicted RBP19.79■□□□□ 0.76
SND1-214ENST00000489417 NPPAP01160 153 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 LMNAP02545 664 aaKnown RBP19.79■□□□□ 0.76
SND1-214ENST00000489417 GP1BAP07359 652 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 DRD2P14416 443 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 DDX5P17844 614 aaKnown RBP19.79■□□□□ 0.76
SND1-214ENST00000489417 NBL1P41271 181 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 ALDH9A1P49189 494 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 FOXM1Q08050 763 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 C6orf10Q5SRN2 563 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 ANXA8L1Q5VT79 327 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 PRMT9Q6P2P2 845 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 BNC2Q6ZN30 1099 aaPredicted RBP19.79■□□□□ 0.76
SND1-214ENST00000489417 NAXDQ8IW45 347 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 EFCAB3Q8N7B9 438 aa19.79■□□□□ 0.76
SND1-214ENST00000489417 HOPXQ9BPY8 73 aaPredicted RBP19.79■□□□□ 0.76
SND1-214ENST00000489417 GPATCH1Q9BRR8 931 aaKnown RBP19.79■□□□□ 0.76
SND1-214ENST00000489417 MMADHCQ9H3L0 296 aaPredicted RBP19.79■□□□□ 0.76
SND1-214ENST00000489417 IGHV5-10-1A0A0J9YXX1 117 aa19.78■□□□□ 0.76
SND1-214ENST00000489417 TMEM150CB9EJG8 249 aa19.78■□□□□ 0.76
SND1-214ENST00000489417 NTN3O00634 580 aaPredicted RBP19.78■□□□□ 0.76
SND1-214ENST00000489417 SCN2BO60939 215 aa19.78■□□□□ 0.76
SND1-214ENST00000489417 KCNH1O95259 989 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms