RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 EFNA3P52797 238 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 MTTPP55157 894 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 RAB38P57729 211 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 TAS2R50P59544 299 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 PCDH1Q08174 1060 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 GTF2H2Q13888 395 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 PCBP2Q15366 365 aaKnown RBP eCLIP12.69□□□□□ -0.38
LMO4-203ENST00000489303 ADPRMQ3LIE5 342 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 TMEM35AQ53FP2 167 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 TECRLQ5HYJ1 363 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 PRAMEF9Q5VWM5 478 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 LIPJQ5W064 366 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 B3GNTL1Q67FW5 361 aaPredicted RBP12.69□□□□□ -0.38
LMO4-203ENST00000489303 GTF2H2CQ6P1K8 395 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 LAS2Q8IYD9 372 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 CYP4X1Q8N118 509 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 CISD2Q8N5K1 135 aaKnown RBP12.69□□□□□ -0.38
LMO4-203ENST00000489303 SUN3Q8TAQ9 357 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 PSMF1Q92530 271 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 TSLPQ969D9 159 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 ATP6V1E2Q96A05 226 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 CMTM7Q96FZ5 175 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 ZNF354BQ96LW1 612 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 GPR78Q96P69 363 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 TBCDQ9BTW9 1192 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■■■□□ 18.4
LMO4-203ENST00000489303 KCNK13Q9HB14 408 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 AGPAT4Q9NRZ5 378 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 ASF1BQ9NVP2 202 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 STMN3Q9NZ72 180 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 MMACHCQ9Y4U1 282 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 PCDHGA11Q9Y5H2 935 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 CSAG2Q9Y5P2 127 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 COPG1Q9Y678 874 aaKnown RBP12.69□□□□□ -0.38
LMO4-203ENST00000489303 SPACA6W5XKT8 324 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 TEX15Q9BXT5 2789 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
LMO4-203ENST00000489303 UGDHO60701 494 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 CELA2AP08217 269 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 TSFMP43897 325 aaKnown RBP12.68□□□□□ -0.38
LMO4-203ENST00000489303 BTG2P78543 158 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 ZNF33BQ06732 778 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 RUNX2Q13950 521 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 E2F2Q14209 437 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 AP5B1Q2VPB7 878 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 TEX35Q5T0J7 233 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 ABHD17CQ6PCB6 329 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 VN1R5Q7Z5H4 357 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 CUZD1Q86UP6 607 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 SHISA5Q8N114 240 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 PLD6Q8N2A8 252 aaKnown RBP12.68□□□□□ -0.38
LMO4-203ENST00000489303 AMER2Q8N7J2 671 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 PTGR2Q8N8N7 351 aaPredicted RBP12.68□□□□□ -0.38
LMO4-203ENST00000489303 EIF1ADQ8N9N8 165 aaKnown RBP12.68□□□□□ -0.38
LMO4-203ENST00000489303 OR7G3Q8NG95 312 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 OR1N1Q8NGS0 311 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 PRR7Q8TB68 274 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 ZNF473Q8WTR7 871 aaKnown RBP12.68□□□□□ -0.38
LMO4-203ENST00000489303 SSC4DQ8WTU2 575 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 HAS2Q92819 552 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 SNRNP40Q96DI7 357 aaKnown RBP12.68□□□□□ -0.38
LMO4-203ENST00000489303 PHF21BQ96EK2 531 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 F2RL3Q96RI0 385 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 MRPL57Q9BQC6 102 aaKnown RBP12.68□□□□□ -0.38
LMO4-203ENST00000489303 AICDAQ9GZX7 198 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 MRPL46Q9H2W6 279 aaKnown RBP12.68□□□□□ -0.38
LMO4-203ENST00000489303 IPPKQ9H8X2 491 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 MMP25Q9NPA2 562 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 PRTFDC1Q9NRG1 225 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 XPR1Q9UBH6 696 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 NTNG1Q9Y2I2 539 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 PCDHGA10Q9Y5H3 936 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 ESPL1Q14674 2120 aa12.68□□□□□ -0.38
LMO4-203ENST00000489303 TRAV17A0A0B4J275 112 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 C4orf51C9J302 202 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 FAM227AF5H4B4 570 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 STX16-NPEPL1H3BU86 382 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 STX16O14662 325 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 TGFB1P01137 390 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 TAC1P20366 129 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 MAOAP21397 527 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 EEF1DP29692 281 aaKnown RBP12.67□□□□□ -0.38
LMO4-203ENST00000489303 PIK3CBP42338 1070 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 SSR2P43308 183 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 RAP1GDS1P52306 607 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 HSD17B7P56937 341 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 SLC26A5P58743 744 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 SLC13A2Q13183 592 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 DDX39BQ13838 428 aaKnown RBP12.67□□□□□ -0.38
LMO4-203ENST00000489303 SLC29A2Q14542 456 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 NR6A1Q15406 480 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 MEP1AQ16819 746 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 ADGRD1Q6QNK2 874 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 TIFABQ6ZNK6 161 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 GOLGA7Q7Z5G4 137 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 ZNF595Q8IYB9 648 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 SLC5A8Q8N695 610 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 C7orf57Q8NEG2 295 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 QRFPRQ96P65 431 aa12.67□□□□□ -0.38
LMO4-203ENST00000489303 MS4A8Q9BY19 250 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms