RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 CC2D2AQ9P2K1 1620 aa4.41□□□□□ -1.7
CCL20-204ENST00000489160 A0A087WZY1 265 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 TRBV5-5A0A0J9YX44 114 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 TMEM150CB9EJG8 249 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 HHLA1C9JL84 531 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 EXTL3O43909 919 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 AMBPP02760 352 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 PCCBP05166 539 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 HMBSP08397 361 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 CEACAM1P13688 526 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 GNB3P16520 340 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 SFTPDP35247 375 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 GLIPR1P48060 266 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 TRPC1P48995 793 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 GBX2P52951 348 aaPredicted RBP4.4□□□□□ -1.71
CCL20-204ENST00000489160 IL10RBQ08334 325 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 OVGP1Q12889 678 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 RIPK1Q13546 671 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 TPD52L1Q16890 204 aaPredicted RBP4.4□□□□□ -1.71
CCL20-204ENST00000489160 KRTAP24-1Q3LI83 254 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 ATAD3BQ5T9A4 648 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 ARHGAP17Q68EM7 881 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 FUT10Q6P4F1 479 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 TMEM207Q6UWW9 146 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 ARSKQ6UWY0 536 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 RCOR2Q8IZ40 523 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 LSMEM2Q8N112 164 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 THEM5Q8N1Q8 247 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 TMEM178AQ8NBL3 297 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 OR7A2PQ8NGA2 310 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 SELENOMQ8WWX9 145 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 PIK3R3Q92569 461 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 LGALS12Q96DT0 336 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 MRPL38Q96DV4 380 aaKnown RBP4.4□□□□□ -1.71
CCL20-204ENST00000489160 DUX3Q96PT4 197 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 NDNQ99608 321 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 CDCA3Q99618 268 aaPredicted RBP4.4□□□□□ -1.71
CCL20-204ENST00000489160 RIMS4Q9H426 269 aaPredicted RBP4.4□□□□□ -1.71
CCL20-204ENST00000489160 ATP13A3Q9H7F0 1226 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 VPS37BQ9H9H4 285 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 UBE4BO95155 1302 aa4.4□□□□□ -1.71
CCL20-204ENST00000489160 A0A087WYN8 130 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 PRR23AA6NEV1 266 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 MSGN1A6NI15 193 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 CCL24O00175 119 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 OR6A2O95222 327 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 IGKV3-20P01619 116 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 ATP1B1P05026 303 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 SP9P0CG40 484 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 NSFP46459 744 aaKnown RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 DNA2P51530 1060 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 CNN1P51911 297 aaKnown RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 GNB1P62873 340 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 ABRQ12979 859 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 SPP2Q13103 211 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 SGCGQ13326 291 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 ZKSCAN8Q15776 578 aaPredicted RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 FFAR4Q5NUL3 377 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 LDLRAP1Q5SW96 308 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 TTC27Q6P3X3 843 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 PRSS55Q6UWB4 352 aaPredicted RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 CCDC73Q6ZRK6 1079 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 GPR141Q7Z602 305 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 ASPGQ86U10 573 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 ZNF573Q86YE8 665 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 UNC5CLQ8IV45 518 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 CCDC60Q8IWA6 550 aaPredicted RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 KLHDC8BQ8IXV7 354 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 BANPQ8N9N5 519 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 SLC37A3Q8NCC5 494 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 GPRC5AQ8NFJ5 357 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 OR5AP2Q8NGF4 316 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 OR1L3Q8NH93 324 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 C10orf90Q96M02 699 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 BTBD9Q96Q07 612 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 ASCL2Q99929 193 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 SPAG8Q99932 426 aaPredicted RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 ZNF577Q9BSK1 485 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 TSPYL1Q9H0U9 437 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 RNF121Q9H920 327 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 PHPT1Q9NRX4 125 aaPredicted RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 HOMER3Q9NSC5 361 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 FARSBQ9NSD9 589 aaKnown RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 FAM212BQ9NTI7 297 aaPredicted RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 TMOD3Q9NYL9 352 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 CLIP2Q9UDT6 1046 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 FOXA2Q9Y261 457 aaPredicted RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 PPP2R2CQ9Y2T4 447 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 DDX49Q9Y6V7 483 aaKnown RBP4.39□□□□□ -1.71
CCL20-204ENST00000489160 SMCHD1A6NHR9 2005 aa4.39□□□□□ -1.71
CCL20-204ENST00000489160 WDR81Q562E7 1941 aa4.38□□□□□ -1.71
CCL20-204ENST00000489160 A0A087WW49 117 aa4.38□□□□□ -1.71
CCL20-204ENST00000489160 A0A087X0K7 114 aa4.38□□□□□ -1.71
CCL20-204ENST00000489160 A0A0B4J203 849 aa4.38□□□□□ -1.71
CCL20-204ENST00000489160 MAGEB16A2A368 324 aa4.38□□□□□ -1.71
CCL20-204ENST00000489160 PRSS46E5RG02 174 aa4.38□□□□□ -1.71
CCL20-204ENST00000489160 F8WDY8 70 aa4.38□□□□□ -1.71
CCL20-204ENST00000489160 AP3B1O00203 1094 aa4.38□□□□□ -1.71
CCL20-204ENST00000489160 FPGTO14772 594 aa4.38□□□□□ -1.71
CCL20-204ENST00000489160 KHDRBS3O75525 346 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms