RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 FJX1Q86VR8 437 aa21.53■■□□□ 1.04
COL9A3-213ENST00000489045 RPS19BP1Q86WX3 136 aaKnown RBP21.53■■□□□ 1.04
COL9A3-213ENST00000489045 SCUBE1Q8IWY4 988 aa21.53■■□□□ 1.04
COL9A3-213ENST00000489045 NFAM1Q8NET5 270 aaPredicted RBP21.53■■□□□ 1.04
COL9A3-213ENST00000489045 SCMH1Q96GD3 660 aa21.53■■□□□ 1.04
COL9A3-213ENST00000489045 C16orf45Q96MC5 204 aaPredicted RBP21.53■■□□□ 1.04
COL9A3-213ENST00000489045 ATOH8Q96SQ7 321 aa21.53■■□□□ 1.04
COL9A3-213ENST00000489045 LRRC1Q9BTT6 524 aa21.53■■□□□ 1.04
COL9A3-213ENST00000489045 IGSF5Q9NSI5 407 aa21.53■■□□□ 1.04
COL9A3-213ENST00000489045 ZDHHC18Q9NUE0 388 aa21.53■■□□□ 1.04
COL9A3-213ENST00000489045 SEC14L3Q9UDX4 400 aa21.53■■□□□ 1.04
COL9A3-213ENST00000489045 UBXN8O00124 270 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 KERAO60938 352 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 CD46P15529 392 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 CERS1P27544 350 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 TPP2P29144 1249 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-213ENST00000489045 HNRNPFP52597 415 aaKnown RBP21.52■■□□□ 1.04
COL9A3-213ENST00000489045 LAPTM5Q13571 262 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 BMPR2Q13873 1038 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 PAGE2BQ5JRK9 111 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 ABHD17CQ6PCB6 329 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 FAM47BQ8NA70 645 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 TMEM52Q8NDY8 209 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 MRRFQ96E11 262 aaKnown RBP21.52■■□□□ 1.04
COL9A3-213ENST00000489045 SERINC2Q96SA4 455 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 COPS7BQ9H9Q2 264 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-213ENST00000489045 PRTFDC1Q9NRG1 225 aa21.52■■□□□ 1.04
COL9A3-213ENST00000489045 A0A1B0GUH1 482 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 TGFBR3LH3BV60 316 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 NEURL1O76050 574 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 MYO1DO94832 1006 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 EEF1DP29692 281 aaKnown RBP21.51■■□□□ 1.03
COL9A3-213ENST00000489045 MTTPP55157 894 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 HIST2H2ACQ16777 129 aaPredicted RBP21.51■■□□□ 1.03
COL9A3-213ENST00000489045 MROH9Q5TGP6 573 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 ZNF468Q5VIY5 522 aaPredicted RBP21.51■■□□□ 1.03
COL9A3-213ENST00000489045 HIST2H2AA3Q6FI13 130 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 MYO7BQ6PIF6 2116 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 CENPLQ8N0S6 344 aaPredicted RBP21.51■■□□□ 1.03
COL9A3-213ENST00000489045 HORMAD2Q8N7B1 307 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 TMEM178AQ8NBL3 297 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 ADAMTS18Q8TE60 1221 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 UBTD2Q8WUN7 234 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 KCTD4Q8WVF5 259 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 NXNL1Q96CM4 212 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 F2RL3Q96RI0 385 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 PNO1Q9NRX1 252 aaKnown RBP21.51■■□□□ 1.03
COL9A3-213ENST00000489045 LRFN1Q9P244 771 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 MRPS33Q9Y291 106 aaKnown RBP21.51■■□□□ 1.03
COL9A3-213ENST00000489045 ACOT9Q9Y305 439 aa21.51■■□□□ 1.03
COL9A3-213ENST00000489045 CLDN4O14493 209 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 ZG16O60844 167 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 URI1O94763 535 aaPredicted RBP21.5■■□□□ 1.03
COL9A3-213ENST00000489045 PPP2R1BP30154 601 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 CASP2P42575 452 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 MSH2P43246 934 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 LIM2P55344 173 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 HSD17B7P56937 341 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 MLF1P58340 268 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 IRF9Q00978 393 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 SLC13A2Q13183 592 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 E2F2Q14209 437 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 TBCCQ15814 346 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 B3GNT7Q8NFL0 401 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 CSF3RQ99062 836 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 DEFB126Q9BYW3 111 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 OPTCQ9UBM4 332 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 DAPP1Q9UN19 280 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 CLDN16Q9Y5I7 305 aa21.5■■□□□ 1.03
COL9A3-213ENST00000489045 CRYBG3Q68DQ2 2970 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 NOTCH2Q04721 2471 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 A0A087X1B8 175 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 TRBV11-1A0A0K0K1C0 115 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 HMX2A2RU54 273 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 K7EPI3 171 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 WISP2O76076 250 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 SP1P08047 785 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 TGM3Q08188 693 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 TERF2Q15554 542 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 ZRSR2Q15696 482 aaKnown RBP21.49■■□□□ 1.03
COL9A3-213ENST00000489045 UAP1Q16222 522 aaPredicted RBP21.49■■□□□ 1.03
COL9A3-213ENST00000489045 UBAP2Q5T6F2 1119 aaKnown RBP21.49■■□□□ 1.03
COL9A3-213ENST00000489045 ZNF787Q6DD87 383 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 SLC25A25Q6KCM7 469 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 GALNTL5Q7Z4T8 443 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 CLNKQ7Z7G1 428 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 ZNF595Q8IYB9 648 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 APCDD1LQ8NCL9 501 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 RELTQ969Z4 430 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 MS4A8Q9BY19 250 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 PRM3Q9NNZ6 103 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 PRDM7Q9NQW5 492 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 SNX15Q9NRS6 342 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 ITPR2Q14571 2701 aa21.49■■□□□ 1.03
COL9A3-213ENST00000489045 ASPDHA6ND91 283 aa21.48■■□□□ 1.03
COL9A3-213ENST00000489045 CYR61O00622 381 aa21.48■■□□□ 1.03
COL9A3-213ENST00000489045 CDK2AP1O14519 115 aa21.48■■□□□ 1.03
COL9A3-213ENST00000489045 SLC25A12O75746 678 aa21.48■■□□□ 1.03
COL9A3-213ENST00000489045 C2P06681 752 aa21.48■■□□□ 1.03
COL9A3-213ENST00000489045 PCNAP12004 261 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms