RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 FLNCQ14315 2725 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 LY6G6EA0A0G2JKS1 128 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 A6NCN8 305 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 VPS26AO75436 327 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 DNAJB5O75953 348 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 EML2O95834 649 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 RPN2P04844 631 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 AMD1P17707 334 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 XRCC1P18887 633 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 ALDH4A1P30038 563 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 SSTR1P30872 391 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 LEPRP48357 1165 aaKnown RBP7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 ARFIP2P53365 341 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 CSE1LP55060 971 aaKnown RBP7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 UCP3P55916 312 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 MPP1Q00013 466 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 HSPA14Q0VDF9 509 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 CDSNQ15517 529 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 RPE65Q16518 533 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 CLPPQ16740 277 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 PLEKHS1Q5SXH7 462 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 TEDDM1Q5T9Z0 273 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 TTC23LQ6PF05 361 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 FAM83HQ6ZRV2 1179 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 CYS1Q717R9 158 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 GALNT7Q86SF2 657 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 CNTN4Q8IWV2 1026 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 IQCKQ8N0W5 287 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 EXD3Q8N9H8 876 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 CPEB3Q8NE35 698 aaKnown RBP7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 OR10G6Q8NH81 332 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 SVIPQ8NHG7 77 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 SKA2Q8WVK7 121 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 ZFPM2Q8WW38 1151 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 PATE1Q8WXA2 126 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 FOPNLQ96NB1 174 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 GFM1Q96RP9 751 aaKnown RBP7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 UCK1Q9HA47 277 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 XPR1Q9UBH6 696 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 TRMT6Q9UJA5 497 aaKnown RBP7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 MAN2B2Q9Y2E5 1009 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 U3KQA8 63 aa7.75□□□□□ -1.17
TRAPPC12-221ENST00000489032 ZFC3H1O60293 1989 aaKnown RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 TCRBV9S1A1TA0A576 114 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 SLC5A10A0PJK1 596 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 LILRA5A6NI73 299 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 OR52A4PA6NMU1 304 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 IQCF5A8MTL0 148 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 H3BQF6 201 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 TMX2-CTNND1H3BSU7 103 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 POLR3GO15318 223 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 DUX1O43812 170 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 NIPSNAP2O75323 286 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 TCEA3O75764 348 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 RPLP0P05388 317 aaKnown RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 MYZAPP0CAP1 466 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 SFTPCP11686 197 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 CCR7P32248 378 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 HSD17B3P37058 310 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 SKIV2L2P42285 1042 aaKnown RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 MAPK9P45984 424 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 RGS4P49798 205 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 PMS2P54278 862 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 SLC12A2P55011 1212 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 UBE2IP63279 158 aaKnown RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 IFFO1Q0D2I5 559 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 NAB1Q13506 487 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 CLCA4Q14CN2 919 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 TUBB8Q3ZCM7 444 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 AMZ1Q400G9 498 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 GLIPR1L2Q4G1C9 344 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 CTSL3PQ5NE16 218 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 LRRC8EQ6NSJ5 796 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 FAM45BPQ6NSW5 357 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 KLHL35Q6PF15 583 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 CNSTQ6PJW8 725 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 RBM44Q6ZP01 1051 aaKnown RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 TMEM26Q6ZUK4 368 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 TRMT10CQ7L0Y3 403 aaKnown RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 SPRED1Q7Z699 444 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 SFTPA2Q8IWL1 248 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 CTAGE3PQ8IX95 158 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 RAB42Q8N4Z0 105 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 ZBTB2Q8N680 514 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 GPATCH11Q8N954 259 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 FAM45AQ8TCE6 357 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 MAGEC3Q8TD91 643 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 UBLCP1Q8WVY7 318 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 TFGQ92734 400 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 KCNJ9Q92806 393 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 INPP5DQ92835 1189 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 NMD3Q96D46 503 aaKnown RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 BOD1Q96IK1 185 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 RMDN2Q96LZ7 410 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 BIRC8Q96P09 236 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 CPNE1Q99829 537 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 SH3GL2Q99962 352 aa7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 WDR83Q9BRX9 315 aaKnown RBP7.74□□□□□ -1.17
TRAPPC12-221ENST00000489032 KRTAP3-1Q9BYR8 98 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms