RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 AGAP20933 346 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 SPRP35270 261 aaPredicted RBP12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 CLCN2P51788 898 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 RAB38P57729 211 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 TGM3Q08188 693 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 E2F2Q14209 437 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 OR4D1Q15615 310 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 TBCCQ15814 346 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 MAPKAPK3Q16644 382 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 PDK4Q16654 411 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 PAGE2BQ5JRK9 111 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 GRTP1Q5TC63 336 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 ZNF468Q5VIY5 522 aaPredicted RBP12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 SP5Q6BEB4 398 aaPredicted RBP12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 XKRXQ6PP77 449 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 BNC2Q6ZN30 1099 aaPredicted RBP12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 MRGPRGQ86SM5 289 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 SIAH3Q8IW03 269 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 POGLUT1Q8NBL1 392 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 CCT6BQ92526 530 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 QRFPRQ96P65 431 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 SERINC2Q96SA4 455 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 RUBCNLQ9H714 662 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 PRTFDC1Q9NRG1 225 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 GRHL1Q9NZI5 618 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 NPIPA1Q9UND3 350 aa12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 KLF13Q9Y2Y9 288 aaPredicted RBP12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 UTP11Q9Y3A2 253 aaKnown RBP12.21□□□□□ -0.45
ATPAF2-207ENST00000488753 CREBBPQ92793 2442 aa12.21□□□□□ -0.46
ATPAF2-207ENST00000488753 ASNA1O43681 348 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 PRAMEF4O60810 478 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 WISP2O76076 250 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 MYO1DO94832 1006 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 TBX6O95947 436 aaPredicted RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 S100BP04271 92 aaPredicted RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 STX2P32856 288 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 CASP2P42575 452 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 HSPA7P48741 367 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 MTTPP55157 894 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 GPX6P59796 221 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 ETF1P62495 437 aaKnown RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 MRPS25P82663 173 aaKnown RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 SRSF11Q05519 484 aaKnown RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 PCDH1Q08174 1060 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 SLC13A2Q13183 592 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 NAB1Q13506 487 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 DOC2AQ14183 400 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 EFTUD2Q15029 972 aaKnown RBP eCLIP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 C3AR1Q16581 482 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 HIST2H2ACQ16777 129 aaPredicted RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 XKR6Q5GH73 641 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 PRAMEF9Q5VWM5 478 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 HIST2H2AA3Q6FI13 130 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 ABHD17CQ6PCB6 329 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 LRRC70Q7Z2Q7 622 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 ZNF227Q86WZ6 799 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 SPPL2CQ8IUH8 684 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 GHDCQ8N2G8 530 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 SPATA6LQ8N4H0 392 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 SNX31Q8N9S9 440 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 SRFBP1Q8NEF9 429 aaKnown RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 C7orf57Q8NEG2 295 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 STAG3L4Q8TBR4 150 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 UBE2E3Q969T4 207 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 MARVELD3Q96A59 401 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 VMP1Q96GC9 406 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 UNKQ9C0B0 810 aaKnown RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 ROGDIQ9GZN7 287 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 RAB17Q9H0T7 212 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 COPS7BQ9H9Q2 264 aaPredicted RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 LYRM4Q9HD34 91 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 CHST11Q9NPF2 352 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 ADAP2Q9NPF8 381 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 CD274Q9NZQ7 290 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 ZNF490Q9ULM2 529 aaPredicted RBP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 RNF112Q9ULX5 631 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 DAPP1Q9UN19 280 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 CLDN16Q9Y5I7 305 aa12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.2□□□□□ -0.46
ATPAF2-207ENST00000488753 A0A0G2JN53 185 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 TRBV11-1A0A0K0K1C0 115 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 CCDC189A1A4V9 331 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 ENO4A6NNW6 628 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 A8MUA0 341 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 KLRC4-KLRK1H3BQV0 150 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 CYR61O00622 381 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 CTNSO60931 367 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 ESRRAP11474 423 aaPredicted RBP12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 ZNF24P17028 368 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 CD22P20273 847 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 CRABP2P29373 138 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 SERPINB1P30740 379 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 KCNC1P48547 511 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 GPR143P51810 404 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 SMSP52788 366 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 PLA2G16P53816 162 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 PLTPP55058 493 aa12.19□□□□□ -0.46
ATPAF2-207ENST00000488753 LIM2P55344 173 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms