RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 DNTTP04053 509 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 OR52Z1P0C646 297 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 FDPSP14324 419 aaKnown RBP3.71□□□□□ -1.82
ITGB1-214ENST00000488427 AADACP22760 399 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 CDC25CP30307 473 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 SFTPDP35247 375 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 DRP2Q13474 957 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 TAB1Q15750 504 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 C2CD6Q53TS8 623 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 PRSS55Q6UWB4 352 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-214ENST00000488427 ZNF519Q8TB69 540 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 NECTIN4Q96NY8 510 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 IWS1Q96ST2 819 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 CDCA3Q99618 268 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-214ENST00000488427 BAG1Q99933 345 aaPredicted RBP3.71□□□□□ -1.82
ITGB1-214ENST00000488427 FERMT1Q9BQL6 677 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 HOXD1Q9GZZ0 328 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 SHARPINQ9H0F6 387 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 SNX25Q9H3E2 840 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 DBNDD1Q9H9R9 158 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 SPHK2Q9NRA0 654 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 NDE1Q9NXR1 346 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 PKD2L2Q9NZM6 624 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 TMEM181Q9P2C4 612 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 IL36AQ9UHA7 158 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 LNPEPQ9UIQ6 1025 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 PRDM4Q9UKN5 801 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 PPP2R2CQ9Y2T4 447 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 CSNK1G3Q9Y6M4 447 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 DUOX1Q9NRD9 1551 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 OTOGLQ3ZCN5 2332 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 SPEGQ15772 3267 aa3.71□□□□□ -1.82
ITGB1-214ENST00000488427 IGF2RP11717 2491 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 A0A087WUV0 522 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-214ENST00000488427 SLC1A7O00341 560 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 DKC1O60832 514 aaKnown RBP eCLIP3.7□□□□□ -1.82
ITGB1-214ENST00000488427 CEACAM4O75871 244 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 RAD23AP54725 363 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 MS4A2Q01362 244 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 GCNT1Q02742 428 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 SULT2A1Q06520 285 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 ELAVL2Q12926 359 aaKnown RBP3.7□□□□□ -1.82
ITGB1-214ENST00000488427 CDH18Q13634 790 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 PTPN14Q15678 1187 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 UGCGQ16739 394 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 TAF1BQ53T94 588 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-214ENST00000488427 XKR3Q5GH77 459 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 MOXD1Q6UVY6 613 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 C16orf54Q6UWD8 224 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 LEKR1Q6ZMV7 388 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 KIF6Q6ZMV9 814 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 MACC1Q6ZN28 852 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 BTN2A1Q7KYR7 527 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 CCDC60Q8IWA6 550 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-214ENST00000488427 C4orf19Q8IY42 314 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 RCOR2Q8IZ40 523 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 CCDC63Q8NA47 563 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 MAPK1IP1LQ8NDC0 245 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 BADQ92934 168 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 OPTNQ96CV9 577 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 COG3Q96JB2 828 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 LINC00615Q96LM1 132 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-214ENST00000488427 CABLES2Q9BTV7 478 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 AP1M1Q9BXS5 423 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 OR10A4Q9H209 315 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 ZCCHC17Q9NP64 241 aaKnown RBP3.7□□□□□ -1.82
ITGB1-214ENST00000488427 MYOZ2Q9NPC6 264 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 B3GAT2Q9NPZ5 323 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 CCDC177Q9NQR7 707 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-214ENST00000488427 EXOC1Q9NV70 894 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 TERF2IPQ9NYB0 399 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 POLLQ9UGP5 575 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 SLC12A6Q9UHW9 1150 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 ANAPC5Q9UJX4 755 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 ATP6V0A2Q9Y487 856 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 FLT4P35916 1363 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 ZZEF1O43149 2961 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 KIF20BQ96Q89 1820 aa3.7□□□□□ -1.82
ITGB1-214ENST00000488427 NBEAQ8NFP9 2946 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 COL4A4P53420 1690 aaPredicted RBP3.69□□□□□ -1.82
ITGB1-214ENST00000488427 RTL9Q8NET4 1388 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 LOC105371242A0A075B767 164 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 A0A1W2PPW3 197 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 TFECO14948 347 aaPredicted RBP3.69□□□□□ -1.82
ITGB1-214ENST00000488427 ECE2O60344 883 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 ATP6AP2O75787 350 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 DDHD2O94830 711 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 MOCS3O95396 460 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 ATP1B1P05026 303 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 APOA4P06727 396 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 CYP2A7P20853 494 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 OPRL1P41146 370 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 HNF4AP41235 474 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 NBL1P41271 181 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 PSMD6Q15008 389 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 NECTIN1Q15223 517 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 NONOQ15233 471 aaKnown RBP eCLIP3.69□□□□□ -1.82
ITGB1-214ENST00000488427 HYAL4Q2M3T9 481 aa3.69□□□□□ -1.82
ITGB1-214ENST00000488427 TWISTNBQ3B726 338 aaPredicted RBP3.69□□□□□ -1.82
ITGB1-214ENST00000488427 LRRC73Q5JTD7 316 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms