RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 ZNF490Q9ULM2 529 aaPredicted RBP10.49□□□□□ -0.73
RAB11FIP3-210ENST00000487899 PPIEQ9UNP9 301 aaKnown RBP10.49□□□□□ -0.73
RAB11FIP3-210ENST00000487899 MMACHCQ9Y4U1 282 aa10.49□□□□□ -0.73
RAB11FIP3-210ENST00000487899 DNAJC13O75165 2243 aa10.49□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ARHGAP21Q5T5U3 1957 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CREBBPQ92793 2442 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 HCFC1P51610 2035 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 HMX2A2RU54 273 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 UBXN8O00124 270 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 PSMD12O00232 456 aaPredicted RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 STK16O75716 305 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TFEBP19484 476 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 STX2P32856 288 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CA7P43166 264 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 MAGEA4P43358 317 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 RAB38P57729 211 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 MLF1P58340 268 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TAS2R50P59544 299 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 BTN3A2P78410 334 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 IRF9Q00978 393 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 GUCY2DQ02846 1103 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CAV1Q03135 178 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ACTN3Q08043 901 aaPredicted RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 NAB1Q13506 487 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SPINK14Q6IE38 97 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SULT1C3Q6IMI6 304 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ZNF793Q6ZN11 406 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 GALNTL5Q7Z4T8 443 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ISCA2Q86U28 154 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 RPS19BP1Q86WX3 136 aaKnown RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CHERPQ8IWX8 916 aaKnown RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CYP4X1Q8N118 509 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 KRT78Q8N1N4 520 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 FBF1Q8TES7 1133 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ITLN2Q8WWU7 325 aaPredicted RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CCT6BQ92526 530 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 PTCD3Q96EY7 689 aaKnown RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CCDC120Q96HB5 630 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 NPLQ9BXD5 320 aaPredicted RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 MS4A8Q9BY19 250 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 REXO4Q9GZR2 422 aaKnown RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TSPAN10Q9H1Z9 355 aaPredicted RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TRIM45Q9H8W5 580 aaPredicted RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 NUDT4Q9NZJ9 180 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SEC14L3Q9UDX4 400 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 RNF112Q9ULX5 631 aa10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 UTP11Q9Y3A2 253 aaKnown RBP10.48□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TRBV11-1A0A0K0K1C0 115 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 A0A1B0GUH1 482 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 A8MUA0 341 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CYR61O00622 381 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 PRKNO60260 465 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 NME2P1O60361 137 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 KERAO60938 352 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SLC25A12O75746 678 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 MYO1DO94832 1006 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SCELO95171 688 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SP1P08047 785 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 MTHFD2P13995 350 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 NME2P22392 152 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 EEF1DP29692 281 aaKnown RBP10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CASQ1P31415 396 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TRHRP34981 398 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SPRP35270 261 aaPredicted RBP10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 GPR143P51810 404 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 PLA2G16P53816 162 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 LIM2P55344 173 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 BMPR2Q13873 1038 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TBCCQ15814 346 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 XKR6Q5GH73 641 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 RNFT1Q5M7Z0 435 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 GRTP1Q5TC63 336 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TRIM40Q6P9F5 258 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ABHD17CQ6PCB6 329 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 UBE3DQ7Z6J8 389 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SNX31Q8N9S9 440 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TMEM178AQ8NBL3 297 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 B3GNT7Q8NFL0 401 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ADAMTS18Q8TE60 1221 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 GPR137Q96N19 417 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 EFCAB11Q9BUY7 163 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CAPS2Q9BXY5 557 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CDCP1Q9H5V8 836 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 PRDM7Q9NQW5 492 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CD274Q9NZQ7 290 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 LRFN1Q9P244 771 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 DAPP1Q9UN19 280 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 PKDREJQ9NTG1 2253 aa10.47□□□□□ -0.73
RAB11FIP3-210ENST00000487899 ANKDD1BA6NHY2 528 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 TMEM200CA6NKL6 621 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SUPT3HB4E1H0 165 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CLGNO14967 610 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 B3GALT2O43825 422 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CCNT2O60583 730 aaKnown RBP10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SLC19A2O60779 497 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SUPT3HO75486 399 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CD46P15529 392 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 CASP2P42575 452 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 HSD17B7P56937 341 aa10.46□□□□□ -0.73
RAB11FIP3-210ENST00000487899 SLC7A5Q01650 507 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms