RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 MED27Q6P2C8 311 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 TRIM40Q6P9F5 258 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 ZNF793Q6ZN11 406 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 TRMT10CQ7L0Y3 403 aaKnown RBP12.11□□□□□ -0.47
RPSA-208ENST00000487876 GOLGA7Q7Z5G4 137 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 MYLK4Q86YV6 388 aaPredicted RBP12.11□□□□□ -0.47
RPSA-208ENST00000487876 LAS2Q8IYD9 372 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 CYP4X1Q8N118 509 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 KIF2BQ8N4N8 673 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 OR7G3Q8NG95 312 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 PHF21BQ96EK2 531 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 SEC16BQ96JE7 1060 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 SCYL1Q96KG9 808 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 LMF1Q96S06 567 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 NPAS2Q99743 824 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 SORBS1Q9BX66 1292 aaKnown RBP12.11□□□□□ -0.47
RPSA-208ENST00000487876 MS4A8Q9BY19 250 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 L2HGDHQ9H9P8 463 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 PRDM7Q9NQW5 492 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 VPS4AQ9UN37 437 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 ANGPTL3Q9Y5C1 460 aa12.11□□□□□ -0.47
RPSA-208ENST00000487876 TCRBV16S1A1N1A0A5B0 115 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 A8MUA0 341 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 A8MUI8 341 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 SAP18O00422 153 aaKnown RBP12.1□□□□□ -0.47
RPSA-208ENST00000487876 WDPCPO95876 746 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 TGFB1P01137 390 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 SNRPAP09012 282 aaKnown RBP12.1□□□□□ -0.47
RPSA-208ENST00000487876 SBK3P0C264 359 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 ICAM2P13598 275 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 CNTFP26441 200 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 PPP2R1BP30154 601 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 PIK3CGP48736 1102 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 MTTPP55157 894 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 LIM2P55344 173 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 RAB38P57729 211 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 SLC26A5P58743 744 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 ARG2P78540 354 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 ACTN3Q08043 901 aaPredicted RBP12.1□□□□□ -0.47
RPSA-208ENST00000487876 SLC29A2Q14542 456 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 PCBP2Q15366 365 aaKnown RBP eCLIP12.1□□□□□ -0.47
RPSA-208ENST00000487876 RPS27LQ71UM5 84 aaKnown RBP12.1□□□□□ -0.47
RPSA-208ENST00000487876 GALNT11Q8NCW6 608 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 OR1N1Q8NGS0 311 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 NSUN5Q96P11 429 aaKnown RBP12.1□□□□□ -0.47
RPSA-208ENST00000487876 CDK15Q96Q40 435 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 SERINC2Q96SA4 455 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 MTERF1Q99551 399 aaKnown RBP12.1□□□□□ -0.47
RPSA-208ENST00000487876 LPAR4Q99677 370 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 NPLQ9BXD5 320 aaPredicted RBP12.1□□□□□ -0.47
RPSA-208ENST00000487876 OR51B5Q9H339 312 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 IPPKQ9H8X2 491 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 ACTR8Q9H981 624 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 COPS7BQ9H9Q2 264 aaPredicted RBP12.1□□□□□ -0.47
RPSA-208ENST00000487876 CLK4Q9HAZ1 481 aaKnown RBP12.1□□□□□ -0.47
RPSA-208ENST00000487876 KCNK13Q9HB14 408 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 PRM3Q9NNZ6 103 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 MMP25Q9NPA2 562 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 PRDM9Q9NQV7 894 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 CLDN16Q9Y5I7 305 aa12.1□□□□□ -0.47
RPSA-208ENST00000487876 A0A088AWK7 358 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 MYOCOSA0A1B0GUC4 107 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 DYTNA2CJ06 578 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 SAGE2PA6NJ88 616 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 OR7A17O14581 309 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 RBP1P09455 135 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 ZNF10P21506 573 aaPredicted RBP12.09□□□□□ -0.47
RPSA-208ENST00000487876 TSFMP43897 325 aaKnown RBP12.09□□□□□ -0.47
RPSA-208ENST00000487876 TNFSF10P50591 281 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 AP2B1P63010 937 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 TLR1Q15399 786 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 NR6A1Q15406 480 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 EXT1Q16394 746 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 CPSF6Q16630 551 aaKnown RBP eCLIP12.09□□□□□ -0.47
RPSA-208ENST00000487876 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 LCE2DQ5TA82 110 aaPredicted RBP12.09□□□□□ -0.47
RPSA-208ENST00000487876 ABHD17BQ5VST6 288 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 H3F3CQ6NXT2 135 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 ADGRD1Q6QNK2 874 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 CLNKQ7Z7G1 428 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 ZGRF1Q86YA3 2104 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 CRLF3Q8IUI8 442 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 SCUBE1Q8IWY4 988 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 BEST3Q8N1M1 668 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 TMEM151AQ8N4L1 468 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 OR52B6Q8NGF0 335 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 HUS1BQ8NHY5 278 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 M1APQ8TC57 530 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 HAS2Q92819 552 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 UBE2E3Q969T4 207 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 KCNC2Q96PR1 638 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 DMRT3Q9NQL9 472 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 PCTPQ9UKL6 214 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 DAPP1Q9UN19 280 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 RNF11Q9Y3C5 154 aa12.09□□□□□ -0.47
RPSA-208ENST00000487876 COPG1Q9Y678 874 aaKnown RBP12.09□□□□□ -0.47
RPSA-208ENST00000487876 SPTBN1Q01082 2364 aaKnown RBP12.08□□□□□ -0.47
RPSA-208ENST00000487876 A0A1B0GTL3 188 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms