RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CRY2Q49AN0 593 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 C9orf152Q5JTZ5 239 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 WDR78Q5VTH9 848 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 ENPP7Q6UWV6 458 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 BTNL8Q6UX41 500 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 C15orf52Q6ZUT6 534 aaKnown RBP2.76□□□□□ -1.97
SMC4-219ENST00000487747 SMPDL3AQ92484 453 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 KATNB1Q9BVA0 655 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 NCKAP1Q9Y2A7 1128 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 PLEKHA6Q9Y2H5 1048 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 KLK4Q9Y5K2 254 aa2.76□□□□□ -1.97
SMC4-219ENST00000487747 FOXI3A8MTJ6 420 aaPredicted RBP2.75□□□□□ -1.97
SMC4-219ENST00000487747 PGRMC2O15173 223 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 LRRTM2O43300 516 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 PENKP01210 267 aaPredicted RBP2.75□□□□□ -1.97
SMC4-219ENST00000487747 CALCAP01258 141 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 HMGCLP35914 325 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 RAB28P51157 221 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 EIF5P55010 431 aaKnown RBP2.75□□□□□ -1.97
SMC4-219ENST00000487747 CKAP4Q07065 602 aaKnown RBP2.75□□□□□ -1.97
SMC4-219ENST00000487747 MZT1Q08AG7 82 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 BECN1Q14457 450 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 ERMARDQ5T6L9 678 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 TCEAL6Q6IPX3 200 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 ZNF544Q6NX49 715 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 CCDC71Q8IV32 467 aaPredicted RBP2.75□□□□□ -1.97
SMC4-219ENST00000487747 MFN1Q8IWA4 741 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 ZNF525Q8N782 197 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 PI4KAP1Q8N8J0 262 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 PCNPQ8WW12 178 aaKnown RBP2.75□□□□□ -1.97
SMC4-219ENST00000487747 HDAC11Q96DB2 347 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 ANKRD27Q96NW4 1050 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 SIGLEC12Q96PQ1 595 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 SP140LQ9H930 580 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 RPF1Q9H9Y2 349 aaKnown RBP2.75□□□□□ -1.97
SMC4-219ENST00000487747 ZNF446Q9NWS9 450 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 NSMCE4AQ9NXX6 385 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 ADAM22Q9P0K1 906 aa2.75□□□□□ -1.97
SMC4-219ENST00000487747 ZNF732B4DXR9 585 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 TMEM150CB9EJG8 249 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 DLATP10515 647 aaKnown RBP2.74□□□□□ -1.97
SMC4-219ENST00000487747 CD1EP15812 388 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 CPT2P23786 658 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 MDH2P40926 338 aaKnown RBP2.74□□□□□ -1.97
SMC4-219ENST00000487747 RBBP4Q09028 425 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 CNTN1Q12860 1018 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 CRMP1Q14194 572 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 ABRAXAS2Q15018 415 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 MAPK11Q15759 364 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 C17orf58Q2M2W7 97 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.74□□□□□ -1.971e-13■■■■■ 65.9
SMC4-219ENST00000487747 SPATA1Q5VX52 437 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 C17orf107Q6ZR85 190 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 TBC1D10CQ8IV04 446 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 POMGNT2Q8NAT1 580 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 ZBP1Q9H171 429 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 DPEP2Q9H4A9 486 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 C10orf88Q9H8K7 445 aa2.74□□□□□ -1.97
SMC4-219ENST00000487747 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.74□□□□□ -1.97
SMC4-219ENST00000487747 RUVBL2Q9Y230 463 aaKnown RBP2.74□□□□□ -1.97
SMC4-219ENST00000487747 URADA6NGE7 173 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 ZNF724A8MTY0 619 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 ZNF487B1APH4 448 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 SAP18O00422 153 aaKnown RBP2.73□□□□□ -1.97
SMC4-219ENST00000487747 BRCC3P46736 316 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 CAPZA2P47755 286 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 GMPSP49915 693 aaPredicted RBP2.73□□□□□ -1.97
SMC4-219ENST00000487747 MFAP3P55082 362 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 FASTKQ14296 549 aaKnown RBP2.73□□□□□ -1.97
SMC4-219ENST00000487747 GSG1Q2KHT4 349 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 GPR141Q7Z602 305 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 UBQLNLQ8IYU4 475 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 ZNF781Q8N8C0 355 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 ZNF564Q8TBZ8 553 aaPredicted RBP2.73□□□□□ -1.97
SMC4-219ENST00000487747 NTNG2Q96CW9 530 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 MORF4L1Q9UBU8 362 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 HBS1LQ9Y450 684 aaKnown RBP2.73□□□□□ -1.97
SMC4-219ENST00000487747 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
SMC4-219ENST00000487747 PASKQ96RG2 1323 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 BCLAF3A2AJT9 711 aaKnown RBP2.72□□□□□ -1.97
SMC4-219ENST00000487747 TNFSF11O14788 317 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 SCO2O43819 266 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 IGKV3-11P04433 115 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 GPX3P22352 226 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 CDX1P47902 265 aaPredicted RBP2.72□□□□□ -1.97
SMC4-219ENST00000487747 UCNP55089 124 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 REP15Q6BDI9 236 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 CAMKVQ8NCB2 501 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 SLC26A7Q8TE54 656 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 TMOD3Q9NYL9 352 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 RCOR3Q9P2K3 495 aaPredicted RBP2.72□□□□□ -1.97
SMC4-219ENST00000487747 MOKQ9UQ07 419 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 SH3GLB1Q9Y371 365 aa2.72□□□□□ -1.97
SMC4-219ENST00000487747 NPIPA3F8WFD2 350 aa2.71□□□□□ -1.98
SMC4-219ENST00000487747 LUC7L3O95232 432 aaKnown RBP2.71□□□□□ -1.98
SMC4-219ENST00000487747 STARD3NLO95772 234 aa2.71□□□□□ -1.98
SMC4-219ENST00000487747 DNTTP04053 509 aa2.71□□□□□ -1.98
SMC4-219ENST00000487747 P0C879 139 aa2.71□□□□□ -1.98
SMC4-219ENST00000487747 GDF1P27539 372 aa2.71□□□□□ -1.98
SMC4-219ENST00000487747 TNFRSF4P43489 277 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms