RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 CHTF18Q8WVB6 975 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 ANKRD7Q92527 254 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 GAL3ST3Q96A11 431 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 LRRC39Q96DD0 335 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 CFAP36Q96G28 342 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 SMIM10Q96HG1 83 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 RHBGQ9H310 441 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 KLHL31Q9H511 634 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 NECTIN3Q9NQS3 549 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 COQ3Q9NZJ6 369 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 ZFATQ9P243 1243 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 IKZF3Q9UKT9 509 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 PPIEQ9UNP9 301 aaKnown RBP7.97□□□□□ -1.13
PRKCB-208ENST00000487674 CHMP2BQ9UQN3 213 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 SLC22A14Q9Y267 594 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 VWA7Q9Y334 891 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 DCHS2Q6V1P9 2916 aa7.97□□□□□ -1.13
PRKCB-208ENST00000487674 ADGRG4Q8IZF6 3080 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 A0A088AWK7 358 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 SYNDIG1LA6NDD5 238 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 NPEPPSL1A6NEC2 478 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 A8MUA0 341 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 KLRC4-KLRK1H3BQV0 150 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 CDC7O00311 574 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 FANCGO15287 622 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 ZNHIT1O43257 154 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 PEX1O43933 1283 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 ITGA10O75578 1167 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 MYO1DO94832 1006 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 GNAZP19086 355 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 TFEBP19484 476 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 CAPN3P20807 821 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 ZNF10P21506 573 aaPredicted RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 HPDP32754 393 aaPredicted RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 PTGS2P35354 604 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 ELK3P41970 407 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 HSD17B7P56937 341 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 FRG1Q14331 258 aaKnown RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 RBBP5Q15291 538 aaKnown RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 CMPK2Q5EBM0 449 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 TRMT10BQ6PF06 316 aaKnown RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 ADAMTSL2Q86TH1 951 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 CDH24Q86UP0 819 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 CD163Q86VB7 1156 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 ZC3HC1Q86WB0 502 aaKnown RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 SULF2Q8IWU5 870 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 TMEM151AQ8N4L1 468 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 NKAPQ8N5F7 415 aaKnown RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 TMEM156Q8N614 296 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 ZFP62Q8NB50 900 aaPredicted RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 TTLQ8NG68 377 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 C16orf52Q8NHV5 167 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 SDCCAG3Q96C92 435 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 VMP1Q96GC9 406 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 SEC16BQ96JE7 1060 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 PDLIM2Q96JY6 352 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 FAR2Q96K12 515 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 EGFL8Q99944 293 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 TREX2Q9BQ50 279 aaPredicted RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 OCSTAMPQ9BR26 566 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 WDR83Q9BRX9 315 aaKnown RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 NPLQ9BXD5 320 aaPredicted RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 AICDAQ9GZX7 198 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 ENKD1Q9H0I2 346 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 DDX47Q9H0S4 455 aaKnown RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 ZNF223Q9UK11 482 aaPredicted RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 FBXW2Q9UKT8 454 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 SNX12Q9UMY4 172 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 MRPS33Q9Y291 106 aaKnown RBP7.96□□□□□ -1.14
PRKCB-208ENST00000487674 OARD1Q9Y530 152 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 TEX264Q9Y6I9 313 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 TACC2O95359 2948 aa7.96□□□□□ -1.14
PRKCB-208ENST00000487674 A0A1B0GTH9 108 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 FAM95CA0A1B0GW59 222 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 CLDN4O14493 209 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 ERI3O43414 337 aaKnown RBP7.95□□□□□ -1.14
PRKCB-208ENST00000487674 B3GALT2O43825 422 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 HS6ST1O60243 411 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 CDC40O60508 579 aaKnown RBP eCLIP7.95□□□□□ -1.14
PRKCB-208ENST00000487674 WDR47O94967 919 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 TUBB4AP04350 444 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 TPOP07202 933 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 IVDP26440 423 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 HNRNPH1P31943 449 aaKnown RBP7.95□□□□□ -1.14
PRKCB-208ENST00000487674 RFC3P40938 356 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 SLC6A12P48065 614 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 SSR4P51571 173 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 RAB38P57729 211 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 BTN3A2P78410 334 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 TLE4Q04727 773 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 SLC13A2Q13183 592 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 SLBPQ14493 270 aaKnown RBP eCLIP7.95□□□□□ -1.14
PRKCB-208ENST00000487674 TSNQ15631 228 aaKnown RBP7.95□□□□□ -1.14
PRKCB-208ENST00000487674 HP1BP3Q5SSJ5 553 aaPredicted RBP7.95□□□□□ -1.14
PRKCB-208ENST00000487674 ARHGAP11AQ6P4F7 1023 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 TMIGD1Q6UXZ0 262 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 MEX3BQ6ZN04 569 aaKnown RBP7.95□□□□□ -1.14
PRKCB-208ENST00000487674 SLCO4C1Q6ZQN7 724 aa7.95□□□□□ -1.14
PRKCB-208ENST00000487674 SYDE1Q6ZW31 735 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms