RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 SETDB1Q15047 1291 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 MEP1AQ16819 746 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 PFKFB4Q16877 469 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 GRHL2Q6ISB3 625 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 MED27Q6P2C8 311 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 KLC3Q6P597 504 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 UBE3DQ7Z6J8 389 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 SCUBE1Q8IWY4 988 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 LAS2Q8IYD9 372 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 PLD6Q8N2A8 252 aaKnown RBP10.73□□□□□ -0.69
SPEN-205ENST00000487496 KIF2BQ8N4N8 673 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 SLC5A8Q8N695 610 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 TEX9Q8N6V9 391 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 BCORP1Q8N888 145 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 CEP112Q8N8E3 955 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 ARMC2Q8NEN0 867 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 NFAM1Q8NET5 270 aaPredicted RBP10.73□□□□□ -0.69
SPEN-205ENST00000487496 OR7G3Q8NG95 312 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 SUN3Q8TAQ9 357 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 ZNF473Q8WTR7 871 aaKnown RBP10.73□□□□□ -0.69
SPEN-205ENST00000487496 ISL2Q96A47 359 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 SERINC2Q96SA4 455 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 PAFAH2Q99487 392 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 SLX1AQ9BQ83 275 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 MS4A8Q9BY19 250 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 VPS11Q9H270 941 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 PRTFDC1Q9NRG1 225 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 CLDN16Q9Y5I7 305 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 LRRC14BA6NHZ5 514 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 SAGE2PA6NJ88 616 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 CYSRT1A8MQ03 144 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 A8MUA0 341 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 POC1B-GALNT4F8VUJ3 575 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 CYR61O00622 381 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 CLDN4O14493 209 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 PRAMEF2O60811 474 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 RNF224P0DH78 156 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 PCNAP12004 261 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 CERS1P27544 350 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 CD96P40200 585 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 SERPINB9P50453 376 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 ST13P50502 369 aaKnown RBP10.72□□□□□ -0.69
SPEN-205ENST00000487496 HNRNPFP52597 415 aaKnown RBP10.72□□□□□ -0.69
SPEN-205ENST00000487496 ALDH18A1P54886 795 aaKnown RBP10.72□□□□□ -0.69
SPEN-205ENST00000487496 LIM2P55344 173 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 HSD17B7P56937 341 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 TAS2R50P59544 299 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 TUBA3CQ13748 450 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 PCBP2Q15366 365 aaKnown RBP eCLIP10.72□□□□□ -0.691e-12■□□□□ 8.4
SPEN-205ENST00000487496 INAQ16352 499 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 TMEM35AQ53FP2 167 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 ZNF324BQ6AW86 544 aaPredicted RBP10.72□□□□□ -0.69
SPEN-205ENST00000487496 TUBA3EQ6PEY2 450 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 RPS19BP1Q86WX3 136 aaKnown RBP10.72□□□□□ -0.69
SPEN-205ENST00000487496 ZNF595Q8IYB9 648 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 LGI4Q8N135 537 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 FAM47BQ8NA70 645 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 TMEM52Q8NDY8 209 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 SRFBP1Q8NEF9 429 aaKnown RBP10.72□□□□□ -0.69
SPEN-205ENST00000487496 UHMK1Q8TAS1 419 aaKnown RBP10.72□□□□□ -0.69
SPEN-205ENST00000487496 ADAMTS18Q8TE60 1221 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 SSC4DQ8WTU2 575 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 KCNC2Q96PR1 638 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 CDCP1Q9H5V8 836 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 COPS7BQ9H9Q2 264 aaPredicted RBP10.72□□□□□ -0.69
SPEN-205ENST00000487496 OLAHQ9NV23 265 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 ZNF358Q9NW07 568 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 ANKRD10Q9NXR5 420 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 ABI3Q9P2A4 366 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 ERRFI1Q9UJM3 462 aaPredicted RBP10.72□□□□□ -0.69
SPEN-205ENST00000487496 NFU1Q9UMS0 254 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 DAPP1Q9UN19 280 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 ANGPTL3Q9Y5C1 460 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 IKBKGQ9Y6K9 419 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 CPAMD8Q8IZJ3 1885 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 POLEQ07864 2286 aa10.72□□□□□ -0.69
SPEN-205ENST00000487496 A0A087WUV0 522 aaPredicted RBP10.71□□□□□ -0.69
SPEN-205ENST00000487496 TGFBR3LH3BV60 316 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 RTCAO00442 366 aaKnown RBP10.71□□□□□ -0.69
SPEN-205ENST00000487496 SH3BGRLO75368 114 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 KRT38O76015 456 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 RASAL1O95294 804 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 SIX3O95343 332 aaPredicted RBP10.71□□□□□ -0.69
SPEN-205ENST00000487496 TGFB1P01137 390 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 RBP1P09455 135 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 MYBL2P10244 700 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 SERPINB1P30740 379 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 SLC13A2Q13183 592 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 RCN2Q14257 317 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 TERF2Q15554 542 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 ZNF766Q5HY98 468 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 TECRLQ5HYJ1 363 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 HIVEP3Q5T1R4 2406 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 LIPJQ5W064 366 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 SPINK14Q6IE38 97 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 ZNF793Q6ZN11 406 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 CHSY3Q70JA7 882 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 IFT20Q8IY31 132 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 ACOT4Q8N9L9 421 aa10.71□□□□□ -0.69
SPEN-205ENST00000487496 MDS2Q8NDY4 140 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms