RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 RTCAO00442 366 aaKnown RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 OR7A17O14581 309 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 OTCP00480 354 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 PDGFAP04085 211 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 CYC1P08574 325 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 RPS17P08708 135 aaKnown RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 KRT4P19013 534 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 TSPAN8P19075 237 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 MAOAP21397 527 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 ATP5F1P24539 256 aaPredicted RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 CASP2P42575 452 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 CCT5P48643 541 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 MTTPP55157 894 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 CDH13P55290 713 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 RAB38P57729 211 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 OR4D2P58180 307 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 RPS13P62277 151 aaKnown RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 AP2B1P63010 937 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 HERVK_113P63132 956 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 IFT88Q13099 833 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 SLC13A2Q13183 592 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 RCN2Q14257 317 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 ZRSR2Q15696 482 aaKnown RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 AP5B1Q2VPB7 878 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 SFT2D3Q587I9 215 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 AGAP7PQ5VUJ5 663 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 KHDRBS2Q5VWX1 349 aaKnown RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 VN1R5Q7Z5H4 357 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 CPEB2Q7Z5Q1 589 aaKnown RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 MILR1Q7Z6M3 343 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 ANKRD37Q7Z713 158 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 PACS2Q86VP3 889 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 TDRPQ86YL5 185 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 SLC22A9Q8IVM8 553 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 SRRM1Q8IYB3 904 aaKnown RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 LAS2Q8IYD9 372 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 SHISA5Q8N114 240 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 RIBC1Q8N443 379 aaPredicted RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 SIRT6Q8N6T7 355 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 CCNYL1Q8N7R7 359 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 OR4F6Q8NGB9 312 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 ADAMTS18Q8TE60 1221 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 ZNF473Q8WTR7 871 aaKnown RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 TSLPQ969D9 159 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 CAVIN3Q969G5 261 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 MTFMTQ96DP5 389 aaKnown RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 CNDP1Q96KN2 507 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 PTCHD1Q96NR3 888 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 AGAP4Q96P64 663 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 TMEM237Q96Q45 408 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 TUBB6Q9BUF5 446 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 ERVK-6Q9BXR3 956 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 PARD6BQ9BYG5 372 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 AICDAQ9GZX7 198 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 ILKAPQ9H0C8 392 aaPredicted RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 OR51B5Q9H339 312 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 ELOVL6Q9H5J4 265 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 DMRT3Q9NQL9 472 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 PTGFRNQ9P2B2 879 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 MID2Q9UJV3 735 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 PLAAQ9Y263 795 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 RNF11Q9Y3C5 154 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 TLN1Q9Y490 2541 aaKnown RBP9.62□□□□□ -0.87
NEK4-204ENST00000487068 EML6Q6ZMW3 1958 aa9.62□□□□□ -0.87
NEK4-204ENST00000487068 MAGEB17A8MXT2 336 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 CLDN4O14493 209 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 PRMT3O60678 531 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 DNAJB6O75190 326 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 CEACAM4O75871 244 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 NUDT17P0C025 328 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 HMOX2P30519 316 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 RHAGQ02094 409 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 TLE1Q04724 770 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 CLCQ05315 142 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 TRAF3Q13114 568 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 PCOLCEQ15113 449 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 ADPRMQ3LIE5 342 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 KRT71Q3SY84 523 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 CCDC153Q494R4 210 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 TMEM35AQ53FP2 167 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 SGO1Q5FBB7 561 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 CFAP157Q5JU67 520 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 ZNF678Q5SXM1 525 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 ABHD17CQ6PCB6 329 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 PAPD4Q6PIY7 484 aaKnown RBP9.61□□□□□ -0.87
NEK4-204ENST00000487068 TMEM205Q6UW68 189 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 QSOX2Q6ZRP7 698 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 LINC00696Q6ZRV3 163 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 CLNKQ7Z7G1 428 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 ZADH2Q8N4Q0 377 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 BRIX1Q8TDN6 353 aaKnown RBP9.61□□□□□ -0.87
NEK4-204ENST00000487068 TRPC4APQ8TEL6 797 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 ZNF483Q8TF39 744 aaPredicted RBP9.61□□□□□ -0.87
NEK4-204ENST00000487068 MZB1Q8WU39 189 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 RGMAQ96B86 450 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 CCDC126Q96EE4 140 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 LPAR4Q99677 370 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 SMAD5Q99717 465 aaKnown RBP9.61□□□□□ -0.87
NEK4-204ENST00000487068 TBCDQ9BTW9 1192 aa9.61□□□□□ -0.87
NEK4-204ENST00000487068 NPLQ9BXD5 320 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms