RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 RTL3Q8N8U3 475 aaKnown RBP3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 CLEC1AQ8NC01 280 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 ZNF248Q8NDW4 579 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 OR2T6Q8NHC8 308 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SPATA18Q8TC71 538 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 CD99L2Q8TCZ2 262 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SLC35C1Q96A29 364 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SYT15Q9BQS2 421 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 CCM2Q9BSQ5 444 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 MED20Q9H944 212 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 PRMT8Q9NR22 394 aaPredicted RBP3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 CYP39A1Q9NYL5 469 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 APPL1Q9UKG1 709 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 KCNK6Q9Y257 313 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 FOXA2Q9Y261 457 aaPredicted RBP3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 ETV7Q9Y603 341 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SPATA31D1Q6ZQQ2 1576 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 ARID2Q68CP9 1835 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SLC15A5A6NIM6 579 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 TCP10L2B9ZVM9 353 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ZBTB14O43829 449 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 VEGFDO43915 354 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 LRCH4O75427 683 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ZNF821O75541 412 aaPredicted RBP3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 PRDM1O75626 825 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ODC1P11926 461 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ANPEPP15144 967 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 FERP16591 822 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 TYMPP19971 482 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 PRKACGP22612 351 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ACKR3P25106 362 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 GJB2P29033 226 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 FEN1P39748 380 aaKnown RBP3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 BTG1P62324 171 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 PMP22Q01453 160 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 DRP2Q13474 957 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 LYPLAL1Q5VWZ2 237 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 CES4AQ5XG92 561 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ETFRF1Q6IPR1 90 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 TMEM64Q6YI46 380 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 FRRS1Q6ZNA5 592 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 TOM1L2Q6ZVM7 507 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 Q6ZVQ6 151 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 CYP4V2Q6ZWL3 525 aaPredicted RBP3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ZNF410Q86VK4 478 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 DND1Q8IYX4 353 aaKnown RBP3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ARL10Q8N8L6 244 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 GPATCH11Q8N954 259 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 RPLP0P6Q8NHW5 317 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ZNF519Q8TB69 540 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 GANCQ8TET4 914 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 SMPDL3AQ92484 453 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 HAS2Q92819 552 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 SLCO2A1Q92959 643 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 CCDC47Q96A33 483 aaKnown RBP3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ART5Q96L15 291 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 GUCD1Q96NT3 240 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 OVOL2Q9BRP0 275 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 FAM213AQ9BRX8 229 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 PAPOLGQ9BWT3 736 aaKnown RBP3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 TRIM7Q9C029 511 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 WWTR1Q9GZV5 400 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 THAP9Q9H5L6 903 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 FNDC4Q9H6D8 234 aaPredicted RBP3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 C3orf14Q9HBI5 128 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 SPHK2Q9NRA0 654 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 BARHL2Q9NY43 387 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 AKAP7Q9P0M2 348 aaPredicted RBP3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 HMG20BQ9P0W2 317 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 PSORS1C1Q9UIG5 152 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 PILRAQ9UKJ1 303 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 PLCL2Q9UPR0 1127 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 ERVK-19Q9WJR5 959 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 WIPI2Q9Y4P8 454 aa3.01□□□□□ -1.93
SNRNP27-204ENST00000487029 UMODL1Q5DID0 1318 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 A0A0U1RQG5 324 aaPredicted RBP3□□□□□ -1.93
SNRNP27-204ENST00000487029 IQCMA0A1B0GVH7 501 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 ATP6AP2A0A1C7CYW4 349 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 GLTPD2A6NH11 291 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 LMO7DNF2Z398 122 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 NPIPB9F8W1W9 429 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 RNF103O00237 685 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 SIGLEC5O15389 551 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 P2RX6O15547 441 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 PSMD3O43242 534 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 ECE2O60344 883 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 RPLP0P05388 317 aaKnown RBP3□□□□□ -1.93
SNRNP27-204ENST00000487029 GSTA2P09210 222 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 MMP10P09238 476 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 NUDT17P0C025 328 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 SKILP12757 684 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 EDNRAP25101 427 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 GPR183P32249 361 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 OR1D2P34982 312 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 HUNKP57058 714 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 GABPAQ06546 454 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 PDE7AQ13946 482 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 SPHARQ15513 63 aa3□□□□□ -1.93
SNRNP27-204ENST00000487029 MTHFSDQ2M296 383 aaKnown RBP3□□□□□ -1.93
SNRNP27-204ENST00000487029 KRTAP13-3Q3SY46 172 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms