RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 PFKFB2O60825 505 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 PRAF2O60831 178 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 CDK2AP2O75956 126 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 SERPING1P05155 500 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 VIMP08670 466 aaKnown RBP5.29□□□□□ -1.56
RTN4-214ENST00000486085 SPP1P10451 314 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 CALRP27797 417 aaKnown RBP5.29□□□□□ -1.56
RTN4-214ENST00000486085 NR0B1P51843 470 aaKnown RBP5.29□□□□□ -1.56
RTN4-214ENST00000486085 MFAP3P55082 362 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 BACE1P56817 501 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 PTENP60484 403 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 HAND2P61296 217 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 BFSP1Q12934 665 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 HNRNPDQ14103 355 aaKnown RBP5.29□□□□□ -1.56
RTN4-214ENST00000486085 TEAD2Q15562 447 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 TMEM30BQ3MIR4 351 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 FAM174BQ3ZCQ3 159 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 HECTD3Q5T447 861 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 LYSMD4Q5XG99 296 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 AMIGO1Q86WK6 493 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 SIX6OS1Q8N1H7 587 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 ZNF713Q8N859 430 aaPredicted RBP5.29□□□□□ -1.56
RTN4-214ENST00000486085 GOT1L1Q8NHS2 421 aaPredicted RBP5.29□□□□□ -1.56
RTN4-214ENST00000486085 RAD54LQ92698 747 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 PYCR2Q96C36 320 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 DYNLL2Q96FJ2 89 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 C4orf45Q96LM5 186 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 VCPKMTQ9H867 229 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 PDRG1Q9NUG6 133 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 RBM28Q9NW13 759 aaKnown RBP5.29□□□□□ -1.56
RTN4-214ENST00000486085 MRPS28Q9Y2Q9 187 aaKnown RBP5.29□□□□□ -1.56
RTN4-214ENST00000486085 KCNK7Q9Y2U2 307 aa5.29□□□□□ -1.56
RTN4-214ENST00000486085 A0A0G2JMZ2 1700 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 MSGN1A6NI15 193 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 IFIT3O14879 490 aaKnown RBP5.28□□□□□ -1.56
RTN4-214ENST00000486085 PGLSO95336 258 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 RPN1P04843 607 aaKnown RBP5.28□□□□□ -1.56
RTN4-214ENST00000486085 PDHBP11177 359 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 LBPP18428 481 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 EPORP19235 508 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 SNRPD1P62314 119 aaKnown RBP5.28□□□□□ -1.56
RTN4-214ENST00000486085 SCN1BQ07699 218 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 TUBB2AQ13885 445 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 SCARB2Q14108 478 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 VGLL4Q14135 290 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 TAZQ16635 292 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 GPR33Q49SQ1 333 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 OTUD3Q5T2D3 398 aaPredicted RBP5.28□□□□□ -1.56
RTN4-214ENST00000486085 CST9Q5W186 159 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 BHLHB9Q6PI77 547 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 TMEM182Q6ZP80 229 aaPredicted RBP5.28□□□□□ -1.56
RTN4-214ENST00000486085 NOTCH2NLQ7Z3S9 236 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 TIGD4Q8IY51 512 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 APCDD1Q8J025 514 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 NKAIN3Q8N8D7 197 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 GPRC5AQ8NFJ5 357 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 OR7A2PQ8NGA2 310 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 CTCFLQ8NI51 663 aaPredicted RBP5.28□□□□□ -1.56
RTN4-214ENST00000486085 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.28□□□□□ -1.56
RTN4-214ENST00000486085 FAM162AQ96A26 154 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 BSCL2Q96G97 398 aaPredicted RBP5.28□□□□□ -1.56
RTN4-214ENST00000486085 TUBB2BQ9BVA1 445 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 SPZ1Q9BXG8 430 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 PITPNM3Q9BZ71 974 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 THAP2Q9H0W7 228 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 P2RY12Q9H244 342 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 ACTL8Q9H568 366 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 ZWILCHQ9H900 591 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 C2orf42Q9NWW7 574 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 EPHA6Q9UF33 1036 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 GTF3C4Q9UKN8 822 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 RLFQ13129 1914 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 MYH4Q9Y623 1939 aa5.28□□□□□ -1.56
RTN4-214ENST00000486085 PARP14Q460N5 1801 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 A0A087WW49 117 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 SNURFLB1AK76 121 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 O00370 1275 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 EDIL3O43854 480 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 ZG16O60844 167 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 PRDM1O75626 825 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 PAK4O96013 591 aaPredicted RBP5.27□□□□□ -1.57
RTN4-214ENST00000486085 GP1BBP13224 206 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 EEF2P13639 858 aaKnown RBP5.27□□□□□ -1.57
RTN4-214ENST00000486085 SP100P23497 879 aaPredicted RBP5.27□□□□□ -1.57
RTN4-214ENST00000486085 PSMB4P28070 264 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 KIF5BP33176 963 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 HMGN5P82970 282 aaKnown RBP5.27□□□□□ -1.57
RTN4-214ENST00000486085 MYL7Q01449 175 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 ITGA9Q13797 1035 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 EXT1Q16394 746 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 RBBP7Q16576 425 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 PWWP2BQ6NUJ5 590 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 PSRC1Q6PGN9 363 aaPredicted RBP5.27□□□□□ -1.57
RTN4-214ENST00000486085 LACC1Q8IV20 430 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 CCDC63Q8NA47 563 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 DBF4BQ8NFT6 615 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 OR1L3Q8NH93 324 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 MRGPRDQ8TDS7 321 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 METTL21AQ8WXB1 218 aa5.27□□□□□ -1.57
RTN4-214ENST00000486085 SEPT1Q8WYJ6 367 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms