RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 RAB38P57729 211 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 GPSM1Q86YR5 675 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 SCUBE1Q8IWY4 988 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 SPATA6LQ8N4H0 392 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 POGLUT1Q8NBL1 392 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 REXO4Q9GZR2 422 aaKnown RBP16.01■□□□□ 0.15
SMC4-216ENST00000485645 CAB39LQ9H9S4 337 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 DNAJC11Q9NVH1 559 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 FBXW2Q9UKT8 454 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 MRPS33Q9Y291 106 aaKnown RBP16.01■□□□□ 0.15
SMC4-216ENST00000485645 KLF13Q9Y2Y9 288 aaPredicted RBP16.01■□□□□ 0.15
SMC4-216ENST00000485645 MEMO1Q9Y316 297 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 APCP25054 2843 aa16.01■□□□□ 0.15
SMC4-216ENST00000485645 KLRC4-KLRK1H3BQV0 150 aa16■□□□□ 0.15
SMC4-216ENST00000485645 TAPBPO15533 448 aa16■□□□□ 0.15
SMC4-216ENST00000485645 WISP3O95389 354 aaPredicted RBP16■□□□□ 0.15
SMC4-216ENST00000485645 CCDC166P0CW27 439 aa16■□□□□ 0.15
SMC4-216ENST00000485645 COX6B1P14854 86 aa16■□□□□ 0.15
SMC4-216ENST00000485645 SSTR1P30872 391 aa16■□□□□ 0.15
SMC4-216ENST00000485645 GGT5P36269 586 aa16■□□□□ 0.15
SMC4-216ENST00000485645 PLA2G16P53816 162 aa16■□□□□ 0.15
SMC4-216ENST00000485645 HSF1Q00613 529 aa16■□□□□ 0.15
SMC4-216ENST00000485645 CALCOCO2Q13137 446 aa16■□□□□ 0.15
SMC4-216ENST00000485645 SLC13A2Q13183 592 aa16■□□□□ 0.15
SMC4-216ENST00000485645 RNFT1Q5M7Z0 435 aa16■□□□□ 0.15
SMC4-216ENST00000485645 CDKL4Q5MAI5 379 aa16■□□□□ 0.15
SMC4-216ENST00000485645 TRIM40Q6P9F5 258 aa16■□□□□ 0.15
SMC4-216ENST00000485645 TMEM156Q8N614 296 aa16■□□□□ 0.15
SMC4-216ENST00000485645 OR2L5Q8NG80 312 aa16■□□□□ 0.15
SMC4-216ENST00000485645 VMP1Q96GC9 406 aa16■□□□□ 0.15
SMC4-216ENST00000485645 CCDC77Q9BR77 488 aa16■□□□□ 0.15
SMC4-216ENST00000485645 TMEM79Q9BSE2 394 aa16■□□□□ 0.15
SMC4-216ENST00000485645 EHD1Q9H4M9 534 aa16■□□□□ 0.15
SMC4-216ENST00000485645 SAYSD1Q9NPB0 183 aa16■□□□□ 0.15
SMC4-216ENST00000485645 PPIEQ9UNP9 301 aaKnown RBP16■□□□□ 0.15
SMC4-216ENST00000485645 CXorf49A8MYA2 514 aaPredicted RBP15.99■□□□□ 0.15
SMC4-216ENST00000485645 PRRG2O14669 202 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 FANCGO15287 622 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 PHGDHO43175 533 aaKnown RBP15.99■□□□□ 0.15
SMC4-216ENST00000485645 ZNHIT1O43257 154 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 ITGA10O75578 1167 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 STK16O75716 305 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 CLDN14O95500 239 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 SNRPB2P08579 225 aaKnown RBP15.99■□□□□ 0.15
SMC4-216ENST00000485645 CD1DP15813 335 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 STMN1P16949 149 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 HSPA7P48741 367 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 MEOX1P50221 254 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 HNRNPFP52597 415 aaKnown RBP15.99■□□□□ 0.15
SMC4-216ENST00000485645 ATP6V0D1P61421 351 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 MRPS25P82663 173 aaKnown RBP15.99■□□□□ 0.15
SMC4-216ENST00000485645 RCN2Q14257 317 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 ADPRMQ3LIE5 342 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 FBXO48Q5FWF7 155 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 XKR6Q5GH73 641 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 SULT1C3Q6IMI6 304 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 GDF7Q7Z4P5 450 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 SULF2Q8IWU5 870 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 ZNF595Q8IYB9 648 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 CYP4Z2PQ8N1L4 340 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 SNX31Q8N9S9 440 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 FAM47BQ8NA70 645 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 AGAP11Q8TF27 550 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 NCLNQ969V3 563 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 QRFPRQ96P65 431 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 SERINC2Q96SA4 455 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 CPNE1Q99829 537 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 DPH5Q9H2P9 285 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 COPS7BQ9H9Q2 264 aaPredicted RBP15.99■□□□□ 0.15
SMC4-216ENST00000485645 CD274Q9NZQ7 290 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 WHRNQ9P202 907 aa15.99■□□□□ 0.15
SMC4-216ENST00000485645 SYNDIG1LA6NDD5 238 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 TGFBR3LH3BV60 316 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 TFECO14948 347 aaPredicted RBP15.98■□□□□ 0.15
SMC4-216ENST00000485645 EIF3HO15372 352 aaKnown RBP eCLIP15.98■□□□□ 0.15
SMC4-216ENST00000485645 ZFAND5O76080 213 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 TBX6O95947 436 aaPredicted RBP15.98■□□□□ 0.15
SMC4-216ENST00000485645 PPP2R1BP30154 601 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 MTTPP55157 894 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 LIM2P55344 173 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 TGM3Q08188 693 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 DOC2AQ14183 400 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 ABHD17CQ6PCB6 329 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 VN1R5Q7Z5H4 357 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 DOLPP1Q86YN1 238 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 CHERPQ8IWX8 916 aaKnown RBP15.98■□□□□ 0.15
SMC4-216ENST00000485645 EID3Q8N140 333 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 TMEM52Q8NDY8 209 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 ESAMQ96AP7 390 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 MTFMTQ96DP5 389 aaKnown RBP15.98■□□□□ 0.15
SMC4-216ENST00000485645 PTCD3Q96EY7 689 aaKnown RBP15.98■□□□□ 0.15
SMC4-216ENST00000485645 PHF12Q96QT6 1004 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 GPR22Q99680 433 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 RBBP8Q99708 897 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 ERP44Q9BS26 406 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 EFCAB11Q9BUY7 163 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 ADAP2Q9NPF8 381 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 ZNF223Q9UK11 482 aaPredicted RBP15.98■□□□□ 0.15
SMC4-216ENST00000485645 ZNF490Q9ULM2 529 aaPredicted RBP15.98■□□□□ 0.15
SMC4-216ENST00000485645 DAPP1Q9UN19 280 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms