RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 CLNKQ7Z7G1 428 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 ZNF781Q8N8C0 355 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 ACOT4Q8N9L9 421 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 OR2Y1Q8NGV0 311 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 OR6Y1Q8NGX8 325 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 TSLPQ969D9 159 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 CNDP1Q96KN2 507 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 QRFPRQ96P65 431 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 KCNC2Q96PR1 638 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 MAPKAP1Q9BPZ7 522 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 EBPLQ9BY08 206 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 TUBB1Q9H4B7 451 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 C3orf18Q9UK00 162 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 RALYQ9UKM9 306 aaKnown RBP11.21□□□□□ -0.61
APTX-227ENST00000485479 CDC14AQ9UNH5 594 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 DNAJC15Q9Y5T4 150 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 GLOD5A6NK44 160 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 IDSB3KWA1 339 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 K7ENP7 123 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 TMPRSS11DO60235 418 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 HSPA4LO95757 839 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 KRT6AP02538 564 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 KRT6BP04259 564 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 SERPINE1P05121 402 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 KLK1P06870 262 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 LINC00032P0C843 101 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 MAOAP21397 527 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 ATP5A1P25705 553 aaKnown RBP11.21□□□□□ -0.62
APTX-227ENST00000485479 KRT6CP48668 564 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 PHEXP78562 749 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 BST1Q10588 318 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 CDC20Q12834 499 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 ATP1A4Q13733 1029 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 DEFB109BQ30KR1 87 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 OR4C11Q6IEV9 310 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 FAM180BQ6P0A1 224 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 INO80CQ6PI98 192 aaPredicted RBP11.21□□□□□ -0.62
APTX-227ENST00000485479 MMP21Q8N119 569 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 OR2T11Q8NH01 316 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 APIPQ96GX9 242 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 SORT1Q99523 831 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 GPR87Q9BY21 358 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 VN1R1Q9GZP7 353 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 MARCOQ9UEW3 520 aaPredicted RBP11.21□□□□□ -0.62
APTX-227ENST00000485479 MED13Q9UHV7 2174 aa11.21□□□□□ -0.62
APTX-227ENST00000485479 ATP6AP2A0A1C7CYW4 349 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 VSTM2BA6NLU5 285 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 AZIN1O14977 448 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 B3GALT2O43825 422 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 NPHS1O60500 1241 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 ATP6AP2O75787 350 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 RAB40ALP0C0E4 278 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 KITP10721 976 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 HIST1H1TP22492 207 aaPredicted RBP11.2□□□□□ -0.62
APTX-227ENST00000485479 GSTM2P28161 218 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 BSGP35613 385 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 SLC1A6P48664 564 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 MTTPP55157 894 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 LIM2P55344 173 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 HNRNPH2P55795 449 aaKnown RBP11.2□□□□□ -0.62
APTX-227ENST00000485479 ID2Q02363 134 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 EEF1A2Q05639 463 aaKnown RBP11.2□□□□□ -0.62
APTX-227ENST00000485479 VAC14Q08AM6 782 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 GALNT1Q10472 559 aaPredicted RBP11.2□□□□□ -0.62
APTX-227ENST00000485479 SLAMF1Q13291 335 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 RAPSNQ13702 412 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 AP5B1Q2VPB7 878 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 C18orf63Q68DL7 685 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 C1orf52Q8N6N3 182 aaKnown RBP11.2□□□□□ -0.62
APTX-227ENST00000485479 SREK1Q8WXA9 508 aaKnown RBP11.2□□□□□ -0.62
APTX-227ENST00000485479 EXTL1Q92935 676 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 FKBP10Q96AY3 582 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 SLC29A3Q9BZD2 475 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 MKKSQ9NPJ1 570 aaPredicted RBP11.2□□□□□ -0.62
APTX-227ENST00000485479 PADI2Q9Y2J8 665 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 PCDHGA6Q9Y5G7 932 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 NUP210LQ5VU65 1888 aa11.2□□□□□ -0.62
APTX-227ENST00000485479 IGLV3-12A0A075B6K2 115 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 ZNF891A8MT65 544 aaPredicted RBP11.19□□□□□ -0.62
APTX-227ENST00000485479 HMGB1P1B2RPK0 211 aaPredicted RBP11.19□□□□□ -0.62
APTX-227ENST00000485479 TGFBR3LH3BV60 316 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 FOXE1O00358 373 aaPredicted RBP11.19□□□□□ -0.62
APTX-227ENST00000485479 BIRC5O15392 142 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 ENO1P06733 434 aaKnown RBP11.19□□□□□ -0.62
APTX-227ENST00000485479 HEXBP07686 556 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 PIM1P11309 404 aaPredicted RBP11.19□□□□□ -0.62
APTX-227ENST00000485479 PTX3P26022 381 aaPredicted RBP11.19□□□□□ -0.62
APTX-227ENST00000485479 PPP2R1BP30154 601 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 ABCE1P61221 599 aaKnown RBP11.19□□□□□ -0.62
APTX-227ENST00000485479 TBL3Q12788 808 aaKnown RBP11.19□□□□□ -0.62
APTX-227ENST00000485479 ASPHQ12797 758 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 PDCD2Q16342 344 aaPredicted RBP11.19□□□□□ -0.62
APTX-227ENST00000485479 SPDYAQ5MJ70 313 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 KANK2Q63ZY3 851 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 COMMD6Q7Z4G1 85 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 PPP1R32Q7Z5V6 425 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 OR4N5Q8IXE1 308 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 DDIASQ8IXT1 998 aa11.19□□□□□ -0.62
APTX-227ENST00000485479 ADAMTS17Q8TE56 1095 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms