RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PAFAH1B1P43034 410 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 MEOX1P50221 254 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 ATP6V0D1P61421 351 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 C18orf21Q32NC0 220 aaPredicted RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 SULT1C3Q6IMI6 304 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 SULF2Q8IWU5 870 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 CPSF7Q8N684 471 aaKnown RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 ACBD4Q8NC06 268 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 C7orf57Q8NEG2 295 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 OR2L5Q8NG80 312 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 TMEM79Q9BSE2 394 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 ADAP2Q9NPF8 381 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 DNAJC11Q9NVH1 559 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 MRPS33Q9Y291 106 aaKnown RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 MTO1Q9Y2Z2 717 aaKnown RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 YARS2Q9Y2Z4 477 aaKnown RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 ANKDD1BA6NHY2 528 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 TGFBR3LH3BV60 316 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 PRRG2O14669 202 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 ADAM10O14672 748 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 ERI3O43414 337 aaKnown RBP10.68□□□□□ -0.7
SCFD1-206ENST00000484733 PEX1O43933 1283 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 MYO1DO94832 1006 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 RPL21P46778 160 aaKnown RBP10.68□□□□□ -0.7
SCFD1-206ENST00000484733 SLC12A2P55011 1212 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 LAPTM5Q13571 262 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 E2F2Q14209 437 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 RCN2Q14257 317 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 VN1R5Q7Z5H4 357 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 TMEM132CQ8N3T6 1108 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 ZFP62Q8NB50 900 aaPredicted RBP10.68□□□□□ -0.7
SCFD1-206ENST00000484733 PTCD3Q96EY7 689 aaKnown RBP10.68□□□□□ -0.7
SCFD1-206ENST00000484733 SPOCK3Q9BQ16 436 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 CCDC77Q9BR77 488 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 TRIM8Q9BZR9 551 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 GRPEL1Q9HAV7 217 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 ZNF490Q9ULM2 529 aaPredicted RBP10.68□□□□□ -0.7
SCFD1-206ENST00000484733 FAM187AA6NFU0 413 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 USP27XA6NNY8 438 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 CYR61O00622 381 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 PRAMEF4O60810 478 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 CTNSO60931 367 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 ZFAND5O76080 213 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 GSTA2P09210 222 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 CD1DP15813 335 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 MTTPP55157 894 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 GNG11P61952 73 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 ELAVL1Q15717 326 aaKnown RBP10.68□□□□□ -0.7
SCFD1-206ENST00000484733 TBCCQ15814 346 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 PRAMEF9Q5VWM5 478 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 CRYBG3Q68DQ2 2970 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 ABHD17CQ6PCB6 329 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 GPSM1Q86YR5 675 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 ZBED8Q8IZ13 594 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 PDPRQ8NCN5 879 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 MORN4Q8NDC4 146 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 TMEM52Q8NDY8 209 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 FAM57AQ8TBR7 257 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 AGAP11Q8TF27 550 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 CDKL2Q92772 493 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 NCLNQ969V3 563 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 KIAA1191Q96A73 305 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 GPR22Q99680 433 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 CPNE1Q99829 537 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 EFCAB11Q9BUY7 163 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 TRIM31Q9BZY9 425 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 ROGDIQ9GZN7 287 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 TIMMDC1Q9NPL8 285 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 PNO1Q9NRX1 252 aaKnown RBP10.68□□□□□ -0.7
SCFD1-206ENST00000484733 PLSCR2Q9NRY7 297 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 WHRNQ9P202 907 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 PTBP2Q9UKA9 531 aaKnown RBP10.68□□□□□ -0.7
SCFD1-206ENST00000484733 DAPP1Q9UN19 280 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 SNX24Q9Y343 169 aa10.68□□□□□ -0.7
SCFD1-206ENST00000484733 MYO9AB2RTY4 2548 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 ITGA10O75578 1167 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 CASP2P42575 452 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 SSR4P51571 173 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 HNRNPFP52597 415 aaKnown RBP10.67□□□□□ -0.7
SCFD1-206ENST00000484733 LIM2P55344 173 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 PCDH1Q08174 1060 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 TGM3Q08188 693 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 TRIM40Q6P9F5 258 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 ZNF295-AS1Q8N0V1 137 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 CYP4Z2PQ8N1L4 340 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 TMEM156Q8N614 296 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 PYROXD1Q8WU10 500 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 LURAP1Q96LR2 239 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 RBBP8Q99708 897 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 TREX2Q9BQ50 279 aaPredicted RBP10.67□□□□□ -0.7
SCFD1-206ENST00000484733 REXO4Q9GZR2 422 aaKnown RBP10.67□□□□□ -0.7
SCFD1-206ENST00000484733 LYRM4Q9HD34 91 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 PRDM7Q9NQW5 492 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 WWOXQ9NZC7 414 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 FBXW2Q9UKT8 454 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 TMEM200CA6NKL6 621 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 FAM159BA6NKW6 160 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 STK16O75716 305 aa10.67□□□□□ -0.7
SCFD1-206ENST00000484733 CCDC166P0CW27 439 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms