RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 EI24O14681 340 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 CLOCKO15516 846 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 GCM2O75603 506 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 SEMA3DO95025 777 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 SCELO95171 688 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 RETP07949 1114 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 GNAO1P09471 354 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 PHEXP78562 749 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 GPR18Q14330 331 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 FZD2Q14332 565 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 ZIC1Q15915 447 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 SLC5A12Q1EHB4 618 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 VMACQ2NL98 169 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 ANXA8L1Q5VT79 327 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 ZNF425Q6IV72 752 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 IYDQ6PHW0 289 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 HS3ST5Q8IZT8 346 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 MARVELD2Q8N4S9 558 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 TSTD1Q8NFU3 115 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 OR52E4Q8NGH9 312 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 GOT1L1Q8NHS2 421 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 C17orf50Q8WW18 174 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 STARD8Q92502 1023 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 CXorf40BQ96DE9 158 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 SHDQ96IW2 340 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 RAB11FIP5Q9BXF6 653 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 KLHL25Q9H0H3 589 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 OR6C2Q9NZP2 312 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 WNT16Q9UBV4 365 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 RAB26Q9ULW5 256 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 FANCMQ8IYD8 2048 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 WDFY3Q8IZQ1 3526 aa8.42□□□□□ -1.06
CDC42SE1-204ENST00000483763 TDRD6O60522 2096 aaKnown RBP8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 IGHV1OR15-9A0A0B4J2B8 117 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 SPTY2D1-AS1A0A0U1RR47 76 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 A0A1B0GTW7 788 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 TRBC2A0A5B9 178 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 A6NHS1 94 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 TMEM229AB2RXF0 380 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 CHURC1-FNTBB4DL54 471 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 CAPN5O15484 640 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 NDUFS4O43181 175 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 GPR37L1O60883 481 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 GMNNO75496 209 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 CLEC3AO75596 197 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 PRSS23O95084 383 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 LDLRP01130 860 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 IMPDH2P12268 514 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 ETFAP13804 333 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 DDCP20711 480 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 MAOBP27338 520 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 AQP1P29972 269 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 CD6P30203 668 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 RABIFP47224 123 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 ALDH9A1P49189 494 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 RPS6KA3P51812 740 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 CHRNB3Q05901 458 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 C1orf61Q13536 156 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 FAM98BQ52LJ0 330 aaKnown RBP8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 INTS11Q5TA45 600 aaKnown RBP8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 ANKRD34AQ69YU3 496 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 OR52E8Q6IFG1 317 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 SPRED1Q7Z699 444 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 VTCN1Q7Z7D3 282 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 ZNF761Q86XN6 746 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 SHISA5Q8N114 240 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 FAM47BQ8NA70 645 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 TNIP2Q8NFZ5 429 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 GPBAR1Q8TDU6 330 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 MS4A6EQ96DS6 147 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 VPS50Q96JG6 964 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 SLC6A18Q96N87 628 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 TRAPPC9Q96Q05 1148 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 SRMSQ9H3Y6 488 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 SOX17Q9H6I2 414 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 DDX31Q9H8H2 851 aaKnown RBP8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 GPR27Q9NS67 375 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 TMEM184CQ9NVA4 438 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 AHSPQ9NZD4 102 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 ZNF639Q9UID6 485 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 VPS4AQ9UN37 437 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 HEBP2Q9Y5Z4 205 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 A0A0A6YYD5 115 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 RNF103-CHMP3A0A140T963 221 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 A0A1W2PPC4 97 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 MAGEA13PA6NCF6 341 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 TMEM221A6NGB7 291 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 GLOD5A6NK44 160 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 M0R296 226 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 B4GALT2O60909 372 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 CLIC3O95833 236 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 FESP07332 822 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 THEGLP0DJG4 465 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 FCGR1AP12314 374 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 NELFEP18615 380 aaKnown RBP8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 SHMT2P34897 504 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 CCR5P51681 352 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 STARD6P59095 220 aa8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 MRPS35P82673 323 aaKnown RBP8.41□□□□□ -1.06
CDC42SE1-204ENST00000483763 MYBPC1Q00872 1141 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms