RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 ARHGAP40Q5TG30 622 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 C1orf189Q5VU69 101 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 MRM1Q6IN84 353 aaKnown RBP14.51□□□□□ -0.09
CCM2-215ENST00000482714 CYP20A1Q6UW02 462 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 COMMD6Q7Z4G1 85 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 ZFAND4Q86XD8 727 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 CACNA2D3Q8IZS8 1091 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 ZNF248Q8NDW4 579 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 OR51Q1Q8NH59 317 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 SNIP1Q8TAD8 396 aaKnown RBP14.51□□□□□ -0.09
CCM2-215ENST00000482714 GATA6Q92908 595 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 TUBGCP3Q96CW5 907 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 MAELQ96JY0 434 aaKnown RBP14.51□□□□□ -0.09
CCM2-215ENST00000482714 ZNF317Q96PQ6 595 aaPredicted RBP14.51□□□□□ -0.09
CCM2-215ENST00000482714 HBEGFQ99075 208 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 MRPL1Q9BYD6 325 aaKnown RBP14.51□□□□□ -0.09
CCM2-215ENST00000482714 CHST8Q9H2A9 424 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 KCMF1Q9P0J7 381 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 GPN3Q9UHW5 284 aaPredicted RBP14.51□□□□□ -0.09
CCM2-215ENST00000482714 PHF11Q9UIL8 331 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 PADI2Q9Y2J8 665 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 USH1CQ9Y6N9 552 aa14.51□□□□□ -0.09
CCM2-215ENST00000482714 A0A0A6YYD5 115 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 SYNDIG1LA6NDD5 238 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 VSTM2BA6NLU5 285 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 SAP18O00422 153 aaKnown RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 ZNF195O14628 629 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 PCDH17O14917 1159 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 CHST10O43529 356 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 SH3BGRLO75368 114 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 SKAP2O75563 359 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 KLK1P06870 262 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 VIMP08670 466 aaKnown RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 PRR35P0CG20 571 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 KITP10721 976 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 RNH1P13489 461 aaKnown RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 TCN2P20062 427 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 ITGAXP20702 1163 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 TLX1P31314 330 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 STAT5AP42229 794 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 EMX2Q04743 252 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 BIKQ13323 160 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 RUNX2Q13950 521 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 NR6A1Q15406 480 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 PDCD2Q16342 344 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 C6orf136Q5SQH8 315 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 EPGNQ6UW88 154 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 ZNF793Q6ZN11 406 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 FAM47EQ6ZV65 393 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 LARP4Q71RC2 724 aaKnown RBP eCLIP14.5□□□□□ -0.099e-6■■■■■ 29.6
CCM2-215ENST00000482714 MTERF4Q7Z6M4 381 aaKnown RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 GPR180Q86V85 440 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 FAM9CQ8IZT9 166 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 C1orf52Q8N6N3 182 aaKnown RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 IL22RA1Q8N6P7 574 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 AMER3Q8N944 861 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 CEP70Q8NHQ1 597 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 ACTRT2Q8TDY3 377 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 APIPQ96GX9 242 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 FCRL1Q96LA6 429 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 TRIM55Q9BYV6 548 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 NUF2Q9BZD4 464 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 SLC22A11Q9NSA0 550 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 C14orf105Q9NVL8 296 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 FARSAQ9Y285 508 aaKnown RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 MRPS33Q9Y291 106 aaKnown RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 PCDHGA6Q9Y5G7 932 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 FRYQ5TBA9 3013 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 SRRM3A6NNA2 597 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 C4orf51C9J302 202 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 PSMD12O00232 456 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 RTCAO00442 366 aaKnown RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 BMP10O95393 424 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 FAM58BPP0C7Q3 252 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 PRPS2P11908 318 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 LBPP18428 481 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 JAK1P23458 1154 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 TPP2P29144 1249 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 TIA1P31483 386 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCM2-215ENST00000482714 LIM2P55344 173 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 RAB38P57729 211 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 IRX1P78414 480 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 RFTN2Q52LD8 501 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 MLIPQ5VWP3 458 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 OGFOD2Q6N063 350 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 NOXRED1Q6NXP6 359 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 PRSS41Q7RTY9 318 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 CA13Q8N1Q1 262 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 OR2T11Q8NH01 316 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 KIAA1143Q96AT1 154 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 TBC1D20Q96BZ9 403 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 CHMP6Q96FZ7 201 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 C3orf30Q96M34 536 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 TMEM121BQ9BXQ6 578 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 AKTIPQ9H8T0 292 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 WDR41Q9HAD4 459 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 ASIC5Q9NY37 505 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 TRPC4Q9UBN4 977 aa14.5□□□□□ -0.09
CCM2-215ENST00000482714 MARCOQ9UEW3 520 aaPredicted RBP14.5□□□□□ -0.09
CCM2-215ENST00000482714 MAPRE3Q9UPY8 281 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms