RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CEACAM20Q6UY09 585 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 LRRC70Q7Z2Q7 622 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 DNAJB8Q8NHS0 232 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 KAT2AQ92830 837 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 IL20RAQ9UHF4 553 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 CLEC4EQ9ULY5 219 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 ANGPT4Q9Y264 503 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 DYRK1BQ9Y463 629 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 PRAMEF33A0A0G2JMD5 474 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 A0A1W2PQ72 361 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 A0A1W2PRB8 838 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 ZSCAN5BA6NJL1 495 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 SLC28A2O43868 658 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 PRAMEF10O60809 474 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 CKBP12277 381 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 BUD31P41223 144 aaPredicted RBP12.19□□□□□ -0.46
VPS52-218ENST00000482399 MAGEA11P43364 429 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 HTR3AP46098 478 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 CSNK1DP48730 415 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 XKP51811 444 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 RAB8AP61006 207 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 SNRPD1P62314 119 aaKnown RBP12.19□□□□□ -0.46
VPS52-218ENST00000482399 DDX53Q86TM3 631 aaKnown RBP12.19□□□□□ -0.46
VPS52-218ENST00000482399 CFAP206Q8IYR0 622 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 SUN5Q8TC36 379 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 PDLIM5Q96HC4 596 aaKnown RBP12.19□□□□□ -0.46
VPS52-218ENST00000482399 TM9SF2Q99805 663 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 WACQ9BTA9 647 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 WRAP53Q9BUR4 548 aaKnown RBP12.19□□□□□ -0.46
VPS52-218ENST00000482399 NMNAT1Q9HAN9 279 aaPredicted RBP12.19□□□□□ -0.46
VPS52-218ENST00000482399 SEC14L3Q9UDX4 400 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 CFAP20Q9Y6A4 193 aaKnown RBP12.19□□□□□ -0.46
VPS52-218ENST00000482399 TMEM202A6NGA9 273 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 PLD2O14939 933 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 GABRR2P28476 465 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 KCNJ10P78508 379 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 FADDQ13158 208 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 SLC5A12Q1EHB4 618 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 MICAQ29983 383 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 HIST2H2AA3Q6FI13 130 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 B3GLCTQ6Y288 498 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 MMP21Q8N119 569 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 OR8H1Q8NGG4 311 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 KLHL6Q8WZ60 621 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 TRIB2Q92519 343 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 FRMD6Q96NE9 622 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 TMED9Q9BVK6 235 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 SLC22A4Q9H015 551 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 ZNF226Q9NYT6 803 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 PAPPA2Q9BXP8 1791 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 FAM172BPA6NC97 362 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 KPNA3O00505 521 aaPredicted RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 TSPAN6O43657 245 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 NME6O75414 186 aaPredicted RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 URODP06132 367 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 C8GP07360 202 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 YES1P07947 543 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 ATP1B2P14415 290 aaPredicted RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 JUPP14923 745 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 CHMP24386 653 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 CSTF2P33240 577 aaKnown RBP eCLIP12.18□□□□□ -0.46
VPS52-218ENST00000482399 CRISP1P54107 249 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 GPR33Q49SQ1 333 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 MORN1Q5T089 497 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 OR2G6Q5TZ20 316 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 LHFPL3Q86UP9 236 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 SYT14Q8NB59 555 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 IL17RDQ8NFM7 739 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 GATAD2BQ8WXI9 593 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 TSSK6Q9BXA6 273 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 KLHL1Q9NR64 748 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 PLAGL1Q9UM63 463 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 SLC9A8Q9Y2E8 581 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 NAALAD2Q9Y3Q0 740 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 NYNRINQ9P2P1 1898 aaKnown RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 SCAMP2O15127 329 aaKnown RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 HOXC11O43248 304 aaPredicted RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 PRAMEF4O60810 478 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 ERAL1O75616 437 aaKnown RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 GPX2P18283 190 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 CD70P32970 193 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 SDC2P34741 201 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 ETV3P41162 512 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 PRAMEF9Q5VWM5 478 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 TMCO2Q7Z6W1 182 aaPredicted RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 LAPTM4BQ86VI4 370 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 ATP6V1C2Q8NEY4 427 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 SORCS1Q8WY21 1168 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 TESCQ96BS2 214 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 TBX5Q99593 518 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 HDHD5Q9BXW7 423 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 RACGAP1Q9H0H5 632 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 FAM83DQ9H4H8 585 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 BEX1Q9HBH7 125 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 FBXL12Q9NXK8 326 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 ZNF624Q9P2J8 865 aaPredicted RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 ZNF282Q9UDV7 671 aaPredicted RBP12.18□□□□□ -0.46
VPS52-218ENST00000482399 ZNF222Q9UK12 451 aa12.18□□□□□ -0.46
VPS52-218ENST00000482399 ERVW-1Q9UQF0 538 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms