RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 BMI1P35226 326 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 CDX1P47902 265 aaPredicted RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 LEPRP48357 1165 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 SUCLG1P53597 346 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 CACNA2D1P54289 1103 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 VCPP55072 806 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 CYP4F2P78329 520 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 HSF2Q03933 536 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 SELPLGQ14242 412 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 ELAVL1Q15717 326 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 AAGABQ6PD74 315 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 KDM7AQ6ZMT4 941 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 ZNF808Q8N4W9 903 aaPredicted RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 SMRP1Q8NCR6 262 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 CPEB3Q8NE35 698 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 SRFBP1Q8NEF9 429 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 KAT2BQ92831 832 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 ZC3HAV1LQ96H79 300 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 MBOAT7Q96N66 472 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 PCGF1Q9BSM1 259 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 HAUS8Q9BT25 410 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 SF3B5Q9BWJ5 86 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 DCTPP1Q9H773 170 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 UPF2Q9HAU5 1272 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 THEGQ9P2T0 379 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 COMMD3-BMI1R4GMX3 469 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TRAV6A0A075B6T7 132 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TTC26A0AVF1 554 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 MROH6A6NGR9 719 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 M0QZ24 198 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 EIF3HO15372 352 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMC6-208ENST00000481708 PRAMEF11O60813 436 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 HIST1H2ABP04908 130 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 CRYGCP07315 174 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 CAPN1P07384 714 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TPM1P09493 284 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 RALAP11233 206 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 HIST1H2ADP20671 130 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 ACO1P21399 889 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 PTGER4P35408 488 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 MAGEA9P43362 315 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 FNTAP49354 379 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 CLDN8P56748 225 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 DLK1P80370 383 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TXNL4AP83876 142 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 BNIP1Q12981 228 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 KRT33BQ14525 404 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 KPNB1Q14974 876 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 RCN1Q15293 331 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TMEM52BQ4KMG9 183 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 RAB6CQ53S08 254 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 HIST3H2AQ7L7L0 130 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TMCO2Q7Z6W1 182 aaPredicted RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 TMEM126BQ8IUX1 230 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TMEM132CQ8N3T6 1108 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 GPRC5AQ8NFJ5 357 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 BPIFCQ8NFQ6 507 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMC6-208ENST00000481708 C11orf24Q96F05 449 aaPredicted RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 THOC3Q96J01 351 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 CDCA3Q99618 268 aaPredicted RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 ABHD14AQ9BUJ0 271 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 RAB6CQ9H0N0 254 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 MEGF9Q9H1U4 602 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 DUSP22Q9NRW4 184 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TMEM161AQ9NX61 479 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 PTTG2Q9NZH5 202 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 PDP1Q9P0J1 537 aaPredicted RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 ZNF510Q9Y2H8 683 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 SPEGQ15772 3267 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TCRBV5S1A1TA0A578 114 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 MYADML2A6NDP7 307 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TTC34A8MYJ7 566 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 PGLSO95336 258 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 GNA14O95837 355 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 IRF1P10914 325 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 GOT1P17174 413 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 SLURP1P55000 103 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 CFHR3Q02985 330 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 PCK2Q16822 640 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 ZSCAN25Q6NSZ9 544 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 B3GLCTQ6Y288 498 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 Q6ZRM9 215 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 MUC20Q8N307 709 aaPredicted RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 ACVR1CQ8NER5 493 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 BEST2Q8NFU1 509 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 ATL1Q8WXF7 558 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 TOP1MTQ969P6 601 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 CLDN23Q96B33 292 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 RASD2Q96D21 266 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 CCT7Q99832 543 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 BPIFA3Q9BQP9 254 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 BICC1Q9H694 974 aaKnown RBP3.1□□□□□ -1.91
SMC6-208ENST00000481708 EXO5Q9H790 373 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 FN3KRPQ9HA64 309 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 SLC2A4RGQ9NR83 387 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 ZFP57Q9NU63 452 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 OR14J1Q9UGF5 321 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 ADAM21Q9UKJ8 722 aa3.1□□□□□ -1.91
SMC6-208ENST00000481708 DHDHQ9UQ10 334 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms