RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 CDH26Q8IXH8 852 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 ZC3H3Q8IXZ2 948 aaKnown RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 GCNT2Q8N0V5 402 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 DNAJC22Q8N4W6 341 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 GBP7Q8N8V2 638 aaPredicted RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 EIF1ADQ8N9N8 165 aaKnown RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 OR4L1Q8NH43 312 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 GANCQ8TET4 914 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 CXorf58Q96LI9 332 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 FUNDC2Q9BWH2 189 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 MRPL13Q9BYD1 178 aaKnown RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 OR2B2Q9GZK3 357 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 MTIF3Q9H2K0 278 aaKnown RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 RIOX1Q9H6W3 641 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 WDR76Q9H967 626 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 OCIAD1Q9NX40 245 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 OR6C2Q9NZP2 312 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 WNT16Q9UBV4 365 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 PILRAQ9UKJ1 303 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 ARID2Q68CP9 1835 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 TRBV5-5A0A0J9YX44 114 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 A0A1W2PPI3 338 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 K7EQM0 130 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 SGK1O00141 431 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 TULP2O00295 520 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 PDXKO00764 312 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 KLHL41O60662 606 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 TXNDC12O95881 172 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 CA3P07451 260 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 APRTP07741 180 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 IQCF3P0C7M6 154 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 CDH1P12830 882 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 RPA2P15927 270 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 PPP2R1AP30153 589 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 TAGLN2P37802 199 aaKnown RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 NR2C2P49116 596 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 C21orf58P58505 322 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 BEX3Q00994 111 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 DLG1Q12959 904 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 CEACAM7Q14002 265 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 BTG3Q14201 252 aaPredicted RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 KIR2DS3Q14952 304 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 HLFQ16534 295 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 TPD52L1Q16890 204 aaPredicted RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 ANKRD55Q3KP44 614 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 ZNF260Q3ZCT1 412 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 LIPKQ5VXJ0 399 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 SLC27A4Q6P1M0 643 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 C17orf107Q6ZR85 190 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 TRMT1LQ7Z2T5 733 aaKnown RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 MRPL10Q7Z7H8 261 aaKnown RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 TRIM58Q8NG06 486 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 OR56B2PQ8NGI1 322 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 OR52K2Q8NGK3 314 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 ZNF473Q8WTR7 871 aaKnown RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 TMED6Q8WW62 240 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 SMG7Q92540 1137 aaKnown RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 TMEM45BQ96B21 275 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 ZNF48Q96MX3 618 aaPredicted RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 ZNF385AQ96PM9 386 aaKnown RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 ZNF607Q96SK3 696 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 S1PR3Q99500 378 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 CCT7Q99832 543 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 POLR3CQ9BUI4 534 aaPredicted RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 SF3B5Q9BWJ5 86 aaKnown RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 COG4Q9H9E3 785 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 UPF2Q9HAU5 1272 aaKnown RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 POT1Q9NUX5 634 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 EXOC1Q9NV70 894 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 ATP6V1HQ9UI12 483 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 PTBP2Q9UKA9 531 aaKnown RBP4.81□□□□□ -1.64
COPA-203ENST00000481040 FOXJ3Q9UPW0 622 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 NAALAD2Q9Y3Q0 740 aa4.81□□□□□ -1.64
COPA-203ENST00000481040 ZMYM6O95789 1325 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 CGNL1Q0VF96 1302 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 LY6G6EA0A0G2JKS1 128 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 PPEF2O14830 753 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 MLNRO43193 412 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 SYNGR3O43761 229 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 CTSVO60911 334 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 OR4F21O95013 312 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 ADCY5O95622 1261 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 MT-ND2P03891 347 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 ATP1B1P05026 303 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 HIST1H2AGP0C0S8 130 aaPredicted RBP4.8□□□□□ -1.64
COPA-203ENST00000481040 EFNA1P20827 205 aaPredicted RBP4.8□□□□□ -1.64
COPA-203ENST00000481040 DPP4P27487 766 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 SLC1A3P43003 542 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 SLC1A6P48664 564 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 GAS1P54826 345 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 CCNA1P78396 465 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 KRTAP1-1Q07627 177 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 NME3Q13232 169 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 GPR50Q13585 617 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 ITGA9Q13797 1035 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 RBM39Q14498 530 aaKnown RBP4.8□□□□□ -1.64
COPA-203ENST00000481040 PXDC1Q5TGL8 231 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 IRAK1BP1Q5VVH5 260 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 MORN5Q5VZ52 161 aa4.8□□□□□ -1.64
COPA-203ENST00000481040 ZNF626Q68DY1 528 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms