RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 TFECO14948 347 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-214ENST00000480562 TAPBPO15533 448 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 B3GALT2O43825 422 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 ITGA10O75578 1167 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 TBX6O95947 436 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-214ENST00000480562 PLA2G16P53816 162 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 SLC12A2P55011 1212 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 RAB38P57729 211 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 SLC13A2Q13183 592 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 TGFBIQ15582 683 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 C16orf47Q6ZP98 133 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-214ENST00000480562 VN1R5Q7Z5H4 357 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 CLNKQ7Z7G1 428 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 ZBED8Q8IZ13 594 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 ZNF295-AS1Q8N0V1 137 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 CYP4Z2PQ8N1L4 340 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 KRT78Q8N1N4 520 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 TMEM156Q8N614 296 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 POGLUT1Q8NBL1 392 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 TTLQ8NG68 377 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 SREK1Q8WXA9 508 aaKnown RBP17.56■□□□□ 0.4
ABCF3-214ENST00000480562 NCLNQ969V3 563 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 ESAMQ96AP7 390 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 LURAP1Q96LR2 239 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 QRFPRQ96P65 431 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 TMEM79Q9BSE2 394 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 MCMBPQ9BTE3 642 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 NPLQ9BXD5 320 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-214ENST00000480562 LIN28AQ9H9Z2 209 aaKnown RBP17.56■□□□□ 0.4
ABCF3-214ENST00000480562 NSMCE4AQ9NXX6 385 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 WWOXQ9NZC7 414 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 CACNA1CQ13936 2221 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 TACC2O95359 2948 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 MYOCOSA0A1B0GUC4 107 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 PHGDHO43175 533 aaKnown RBP17.55■□□□□ 0.4
ABCF3-214ENST00000480562 PEX1O43933 1283 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 HS6ST1O60243 411 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 PRKNO60260 465 aaPredicted RBP17.55■□□□□ 0.4
ABCF3-214ENST00000480562 PRAMEF4O60810 478 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 CLEC3AO75596 197 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 WISP3O95389 354 aaPredicted RBP17.55■□□□□ 0.4
ABCF3-214ENST00000480562 KIR3DL1P43629 444 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 GPR85P60893 370 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 PRAMEF9Q5VWM5 478 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 MDGA2Q7Z553 956 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 VMP1Q96GC9 406 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 DMRTA2Q96SC8 542 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 KRT12Q99456 494 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 DERL2Q9GZP9 239 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 NT5DC2Q9H857 520 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 POPDC3Q9HBV1 291 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 DNAJC11Q9NVH1 559 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 PPT2Q9UMR5 302 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 SAR1BQ9Y6B6 198 aa17.55■□□□□ 0.4
ABCF3-214ENST00000480562 AKAP9Q99996 3911 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 A0A1B0GTH9 108 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 ANKDD1BA6NHY2 528 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 CXorf49A8MYA2 514 aaPredicted RBP17.54■□□□□ 0.4
ABCF3-214ENST00000480562 E9PLN8 166 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 KLRC4-KLRK1H3BQV0 150 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 CCDC188H7C350 402 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 CLDN4O14493 209 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 CDC40O60508 579 aaKnown RBP eCLIP17.54■□□□□ 0.4
ABCF3-214ENST00000480562 POU3F2P20265 443 aaPredicted RBP17.54■□□□□ 0.4
ABCF3-214ENST00000480562 CERS1P27544 350 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 SSTR1P30872 391 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 HSPA7P48741 367 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 GPR143P51810 404 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 HSD17B7P56937 341 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 POU4F1Q01851 419 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 TERF2Q15554 542 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 GPSM1Q86YR5 675 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 SNX31Q8N9S9 440 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 OR2L5Q8NG80 312 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 PHF10Q8WUB8 498 aaKnown RBP17.54■□□□□ 0.4
ABCF3-214ENST00000480562 CSF3RQ99062 836 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 NAPGQ99747 312 aaPredicted RBP17.54■□□□□ 0.4
ABCF3-214ENST00000480562 VKORC1Q9BQB6 163 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 CAPS2Q9BXY5 557 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 REXO4Q9GZR2 422 aaKnown RBP17.54■□□□□ 0.4
ABCF3-214ENST00000480562 GPRC5BQ9NZH0 403 aa17.54■□□□□ 0.4
ABCF3-214ENST00000480562 ZNF490Q9ULM2 529 aaPredicted RBP17.54■□□□□ 0.4
ABCF3-214ENST00000480562 PPIEQ9UNP9 301 aaKnown RBP17.54■□□□□ 0.4
ABCF3-214ENST00000480562 POLQO75417 2590 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 A0A088AWK7 358 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 CLGNO14967 610 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 ZFAND5O76080 213 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 CCDC166P0CW27 439 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 ZNF10P21506 573 aaPredicted RBP17.53■□□□□ 0.4
ABCF3-214ENST00000480562 GSTM2P28161 218 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 PTGS2P35354 604 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 SSR4P51571 173 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 LIM2P55344 173 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 DOC2AQ14183 400 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 OR4D1Q15615 310 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 ADPRMQ3LIE5 342 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 CMPK2Q5EBM0 449 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 XKR6Q5GH73 641 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 TRIM40Q6P9F5 258 aa17.53■□□□□ 0.4
ABCF3-214ENST00000480562 ABHD17CQ6PCB6 329 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms