RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CCR10P46092 362 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 RAP1GDS1P52306 607 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 SLC18A1P54219 525 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 RRADP55042 308 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 OLR1P78380 273 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 GALNT1Q10472 559 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-219ENST00000479941 TUBB8Q3ZCM7 444 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 MINDY4Q4G0A6 757 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 AGBL2Q5U5Z8 902 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 OR4C11Q6IEV9 310 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 PPP1R32Q7Z5V6 425 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 UBE3DQ7Z6J8 389 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 MRGPREQ86SM8 312 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 NUDCD3Q8IVD9 361 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 APLFQ8IW19 511 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-219ENST00000479941 CA13Q8N1Q1 262 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 RNF175Q8N4F7 328 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 TMEM102Q8N9M5 508 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-219ENST00000479941 APOBEC4Q8WW27 367 aaKnown RBP10.22□□□□□ -0.77
ATG4B-219ENST00000479941 METTL21AQ8WXB1 218 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 TLCD1Q96CP7 247 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 WBP1Q96G27 269 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 FER1L6-AS2Q96M78 137 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 MECRQ9BV79 373 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 NMRK1Q9NWW6 199 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 P4HTMQ9NXG6 502 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 AHSPQ9NZD4 102 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 MKL2Q9ULH7 1088 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 DAPP1Q9UN19 280 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 HS3ST3B1Q9Y662 390 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 KCNMB2Q9Y691 235 aa10.22□□□□□ -0.77
ATG4B-219ENST00000479941 TLN1Q9Y490 2541 aaKnown RBP10.22□□□□□ -0.77
ATG4B-219ENST00000479941 CCDC88CQ9P219 2028 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 ARGFXA6NJG6 315 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 SAP18O00422 153 aaKnown RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 RTCAO00442 366 aaKnown RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 MANBAO00462 879 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 PLPP1O14494 284 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 SOCS6O14544 535 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 UBFD1O14562 309 aaKnown RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 BIRC5O15392 142 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 DNAJB6O75190 326 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 ALOX12BO75342 701 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 JRKO75564 520 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 ETHE1O95571 254 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 C8orf89P0DMQ9 161 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 ATP5A1P25705 553 aaKnown RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 CERS1P27544 350 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 SERPINB4P48594 390 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 LIM2P55344 173 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 RAB38P57729 211 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 MAGOHP61326 146 aaKnown RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 CSTF3Q12996 717 aaKnown RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 ATP1A4Q13733 1029 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 RUNX2Q13950 521 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 SGO1Q5FBB7 561 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 MFSD4BQ5TF39 518 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 TMEM205Q6UW68 189 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 ZNF793Q6ZN11 406 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 CUZD1Q86UP6 607 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 NUDT13Q86X67 352 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 TMEM151BQ8IW70 566 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 ZCCHC7Q8N3Z6 543 aaKnown RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 GOLGA6L1Q8N7Z2 621 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 GBP7Q8N8V2 638 aaPredicted RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 ACOT4Q8N9L9 421 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 PLPP5Q8NEB5 264 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 OR6Y1Q8NGX8 325 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 TTC9Q92623 222 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 EXTL1Q92935 676 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 UBL7Q96S82 380 aaPredicted RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 ARHGAP9Q9BRR9 750 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 VN1R1Q9GZP7 353 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 EML4Q9HC35 981 aaKnown RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 LYRM4Q9HD34 91 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 LANCL2Q9NS86 450 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 FARSBQ9NSD9 589 aaKnown RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 MS4A12Q9NXJ0 267 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 VPS29Q9UBQ0 182 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 C19orf25Q9UFG5 118 aaPredicted RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 MRPS33Q9Y291 106 aaKnown RBP10.21□□□□□ -0.77
ATG4B-219ENST00000479941 SPACA6W5XKT8 324 aa10.21□□□□□ -0.77
ATG4B-219ENST00000479941 A0A1W2PQ72 361 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 SERTM1A2A2V5 107 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 BLACEA4D250 179 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 CLDN4O14493 209 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 PRMT3O60678 531 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 B4GALT2O60909 372 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 CRCPO75575 148 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 CDC123O75794 336 aaPredicted RBP10.2□□□□□ -0.78
ATG4B-219ENST00000479941 DHRS4L1P0CG22 281 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 UROSP10746 265 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 ACPPP15309 386 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 BSGP35613 385 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 ATRXP46100 2492 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 FOXA1P55317 472 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 HSD17B7P56937 341 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 RHAGQ02094 409 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 SLAMF1Q13291 335 aa10.2□□□□□ -0.78
ATG4B-219ENST00000479941 MPP2Q14168 576 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms