RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CREB3L4Q8TEY5 395 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 CCT6BQ92526 530 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 RELTQ969Z4 430 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 GAL3ST3Q96A11 431 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 SMIM10Q96HG1 83 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 FAR2Q96K12 515 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 CAB39LQ9H9S4 337 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 PRDM9Q9NQV7 894 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 KLHL1Q9NR64 748 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 WWOXQ9NZC7 414 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 MTO1Q9Y2Z2 717 aaKnown RBP13.44□□□□□ -0.26
ATG4B-218ENST00000479554 TCRBV16S1A1N1A0A5B0 115 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 TLDC2A0PJX2 215 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 CXorf49A8MYA2 514 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-218ENST00000479554 RGS16O15492 202 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-218ENST00000479554 PHGDHO43175 533 aaKnown RBP13.43□□□□□ -0.26
ATG4B-218ENST00000479554 WISP3O95389 354 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-218ENST00000479554 GSTA2P09210 222 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 CCDC166P0CW27 439 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 STMN1P16949 149 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 MAOAP21397 527 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 GSTM2P28161 218 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 EEF1DP29692 281 aaKnown RBP13.43□□□□□ -0.26
ATG4B-218ENST00000479554 RPS19BP1Q86WX3 136 aaKnown RBP13.43□□□□□ -0.26
ATG4B-218ENST00000479554 GPSM1Q86YR5 675 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 RIBC1Q8N443 379 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-218ENST00000479554 SPATA6LQ8N4H0 392 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 KIF2BQ8N4N8 673 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 TMEM178AQ8NBL3 297 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 ELP5Q8TE02 316 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 EPS8L3Q8TE67 593 aaKnown RBP13.43□□□□□ -0.26
ATG4B-218ENST00000479554 SCMH1Q96GD3 660 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 GPR22Q99680 433 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 RBBP8Q99708 897 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 CPNE1Q99829 537 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 TMEM79Q9BSE2 394 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 CAPS2Q9BXY5 557 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 HES7Q9BYE0 225 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 AICDAQ9GZX7 198 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 CDCP1Q9H5V8 836 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 CNOT10Q9H9A5 744 aaKnown RBP13.43□□□□□ -0.26
ATG4B-218ENST00000479554 GPRC5BQ9NZH0 403 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 SUCOQ9UBS9 1254 aaKnown RBP13.43□□□□□ -0.26
ATG4B-218ENST00000479554 LRBAP50851 2863 aa13.43□□□□□ -0.26
ATG4B-218ENST00000479554 DIDO1Q9BTC0 2240 aaKnown RBP13.42□□□□□ -0.26
ATG4B-218ENST00000479554 A0A088AWK7 358 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 IGKV3D-11A0A0A0MRZ8 115 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 A0A0G2JN53 185 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 EXOC1LA0A1B0GW35 172 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 TCRBV9S1A1TA0A576 114 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 FAM159BA6NKW6 160 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 A8MUA0 341 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 FAM227AF5H4B4 570 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 CDK2AP1O14519 115 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 CLGNO14967 610 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 ERI3O43414 337 aaKnown RBP13.42□□□□□ -0.26
ATG4B-218ENST00000479554 MLYCDO95822 493 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 ZNF10P21506 573 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-218ENST00000479554 HNRNPH1P31943 449 aaKnown RBP13.42□□□□□ -0.26
ATG4B-218ENST00000479554 GP5P40197 560 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 GPX6P59796 221 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 ATP6V0D1P61421 351 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 BTN3A2P78410 334 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.42□□□□□ -0.26
ATG4B-218ENST00000479554 SPINK14Q6IE38 97 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 C3orf62Q6ZUJ4 267 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 CTAGE3PQ8IX95 158 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 ARFGAP2Q8N6H7 521 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 SNX31Q8N9S9 440 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 FAM98AQ8NCA5 519 aaKnown RBP13.42□□□□□ -0.26
ATG4B-218ENST00000479554 TLCD1Q96CP7 247 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 SEC16BQ96JE7 1060 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 PITHD1Q9GZP4 211 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-218ENST00000479554 NECTIN3Q9NQS3 549 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 DNAJC11Q9NVH1 559 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 LRFN1Q9P244 771 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 COPG2Q9UBF2 871 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 FETUBQ9UGM5 382 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 LGALS13Q9UHV8 139 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 MMACHCQ9Y4U1 282 aa13.42□□□□□ -0.26
ATG4B-218ENST00000479554 LRIT2A6NDA9 550 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 ANKDD1BA6NHY2 528 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 SMIM23A6NLE4 172 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 TAPBPO15533 448 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 CDH16O75309 829 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 CLEC3AO75596 197 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 NEURL1O76050 574 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 S100BP04271 92 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-218ENST00000479554 SP1P08047 785 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 CD1DP15813 335 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 TPP2P29144 1249 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-218ENST00000479554 HPDP32754 393 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-218ENST00000479554 GGT5P36269 586 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 CA7P43166 264 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 HSPA7P48741 367 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 CASP6P55212 293 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 ALDH6A1Q02252 535 aaKnown RBP13.41□□□□□ -0.26
ATG4B-218ENST00000479554 GABPB1Q06547 395 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-218ENST00000479554 OR4D1Q15615 310 aa13.41□□□□□ -0.26
ATG4B-218ENST00000479554 FBXO48Q5FWF7 155 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms