RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 WDR53Q7Z5U6 358 aaPredicted RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 TP53I13Q8NBR0 393 aaPredicted RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 DENND6BQ8NEG7 585 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 SLC46A2Q9BY10 475 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 SUV39H2Q9H5I1 410 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 HCFC1R1Q9NWW0 138 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 KCTD5Q9NXV2 234 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 RHCGQ9UBD6 479 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 CCDC88CQ9P219 2028 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 RANBP2P49792 3224 aaKnown RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 A0A0G2JMP0 313 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 C1orf226A1L170 272 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 EFCAB10A6NFE3 127 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 ETFAP13804 333 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 PRPH2P23942 346 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 TIE1P35590 1138 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 HNF4AP41235 474 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 CCR2P41597 374 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 SELENOWP63302 87 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 GPLD1P80108 840 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 HOXC5Q00444 222 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 CD83Q01151 205 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 MXD1Q05195 221 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 HYAL2Q12891 473 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 CSTF3Q12996 717 aaKnown RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 NOGQ13253 232 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 GANABQ14697 944 aaKnown RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 MICAQ29983 383 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 TRIM60Q495X7 471 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 TTC23LQ6PF05 361 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 TRIM48Q8IWZ4 208 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 ST13P5Q8NFI4 369 aaPredicted RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 ASB11Q8WXH4 323 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 TMEM121BQ9BXQ6 578 aaPredicted RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 BRD9Q9H8M2 597 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 ASAH2Q9NR71 780 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 GRIP1Q9Y3R0 1128 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 PCDHGB2Q9Y5G2 931 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 USP34Q70CQ2 3546 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 GABRR3A8MPY1 467 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 PLK4O00444 970 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 DPM1O60762 260 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 SOCS5O75159 536 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 ETHE1O95571 254 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 MAPK1P28482 360 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 FEN1P39748 380 aaKnown RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 TLE2Q04725 743 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 SRSF11Q05519 484 aaKnown RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 EIF4HQ15056 248 aaKnown RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 GPR33Q49SQ1 333 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 RFPL4BQ6ZWI9 263 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 TCEAL8Q8IYN2 117 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 ANKK1Q8NFD2 765 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 FLCNQ8NFG4 579 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 OR8J2Q8NGG1 315 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 FIBINQ8TAL6 211 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 CRELD1Q96HD1 420 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 LMLNQ96KR4 655 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 IL4I1Q96RQ9 567 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 DUSP26Q9BV47 211 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 CDCA4Q9BXL8 241 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 SRRQ9GZT4 340 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 RABL2BQ9UNT1 228 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 POFUT2Q9Y2G5 429 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 A0A075B6Q4 140 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 A0A0X1KG70 313 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 OR2AG2A6NM03 316 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 ADAMDEC1O15204 470 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 TGM5O43548 720 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 ARHGEF15O94989 841 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 ITGA2P17301 1181 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 CD72P21854 359 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 POU1F1P28069 291 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 CHIT1Q13231 466 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 LEXMQ3ZCV2 418 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 YIF1BQ5BJH7 314 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 TMPRSS11AQ6ZMR5 421 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 GET4Q7L5D6 327 aaPredicted RBP12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 SIMC1Q8NDZ2 872 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 SLC7A6Q92536 515 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 ZNF558Q96NG5 402 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 FAM129BQ96TA1 746 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 TCF25Q9BQ70 676 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 LINC00597Q9H2U6 94 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 DYRK4Q9NR20 520 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 DKK3Q9UBP4 350 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 PCM1Q15154 2024 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 SMIM30A4D0T7 59 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 HMX3A6NHT5 357 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 LEFTY2O00292 366 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 URODP06132 367 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 IGFBP1P08833 259 aaPredicted RBP12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 CHRM5P08912 532 aaPredicted RBP12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 SSTR4P31391 388 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 CNR2P34972 360 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 CRATP43155 626 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 ABRQ12979 859 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 HKDC1Q2TB90 917 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 KLHL17Q6TDP4 642 aa12.74□□□□□ -0.37
PDZRN3-208ENST00000479530 MSANTD1Q6ZTZ1 278 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms