RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CCL11P51671 97 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 EFNA3P52797 238 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 HSD17B7P56937 341 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 RAB38P57729 211 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 FOXL2P58012 376 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 C19orf57Q0VDD7 668 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 LCP2Q13094 533 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 BIKQ13323 160 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 RUNX2Q13950 521 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 AP5B1Q2VPB7 878 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 TNFAIP8L3Q5GJ75 292 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 VWA5B1Q5TIE3 1220 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 ADNP2Q6IQ32 1131 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 LRIG3Q6UXM1 1119 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 ZNF595Q8IYB9 648 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 ZNF843Q8N446 348 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 FDCSPQ8NFU4 85 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 OR4F6Q8NGB9 312 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 OR5T3Q8NGG3 340 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 PPP4R1Q8TF05 950 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 APOPT1Q96IL0 206 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 NSUN5Q96P11 429 aaKnown RBP14.57□□□□□ -0.08
C9orf3-217ENST00000479161 TMEM237Q96Q45 408 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 SERPINI1Q99574 410 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 SLC29A3Q9BZD2 475 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 LHPPQ9H008 270 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 DDX31Q9H8H2 851 aaKnown RBP14.57□□□□□ -0.08
C9orf3-217ENST00000479161 SSU72Q9NP77 194 aaKnown RBP14.57□□□□□ -0.08
C9orf3-217ENST00000479161 SEMA4BQ9NPR2 832 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-217ENST00000479161 PRDM9Q9NQV7 894 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 OXSMQ9NWU1 459 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 KCMF1Q9P0J7 381 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 SNX6Q9UNH7 406 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 MRPS33Q9Y291 106 aaKnown RBP14.57□□□□□ -0.08
C9orf3-217ENST00000479161 TNRC6AQ8NDV7 1962 aaKnown RBP14.56□□□□□ -0.08
C9orf3-217ENST00000479161 NSG1A0A0A6YYJ2 146 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 SERTM1A2A2V5 107 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 ZNF860A6NHJ4 632 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 B8ZZF3 427 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 CYR61O00622 381 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 CLDN4O14493 209 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 PRMT3O60678 531 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 JRKO75564 520 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 DNAJB5O75953 348 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 C1QL1O75973 258 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 TGFB1P01137 390 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 SERPINA7P05543 415 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 ENO1P06733 434 aaKnown RBP14.56□□□□□ -0.08
C9orf3-217ENST00000479161 HSD3B1P14060 373 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 CPA3P15088 417 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 HSD3B2P26439 372 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 PGDP52209 483 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 PLA2G16P53816 162 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 ZNF844Q08AG5 666 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 ASPHQ12797 758 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 IFT88Q13099 833 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 PCOLCEQ15113 449 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 TERF2Q15554 542 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 NSDHLQ15738 373 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 MINDY4Q4G0A6 757 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 PLAG1Q6DJT9 500 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 OR4C11Q6IEV9 310 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 IGFL2Q6UWQ7 119 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 CPEB2Q7Z5Q1 589 aaKnown RBP14.56□□□□□ -0.08
C9orf3-217ENST00000479161 MYLK4Q86YV6 388 aaPredicted RBP14.56□□□□□ -0.08
C9orf3-217ENST00000479161 KBTBD2Q8IY47 623 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 PRSS58Q8IYP2 241 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 ACOT4Q8N9L9 421 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 PKNOX2Q96KN3 472 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 MTERF1Q99551 399 aaKnown RBP14.56□□□□□ -0.08
C9orf3-217ENST00000479161 TRMOQ9BU70 441 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 ZNF552Q9H707 407 aaPredicted RBP14.56□□□□□ -0.08
C9orf3-217ENST00000479161 COPS7BQ9H9Q2 264 aaPredicted RBP14.56□□□□□ -0.08
C9orf3-217ENST00000479161 NMRK1Q9NWW6 199 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 ANAPC2Q9UJX6 822 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 ZNF225Q9UK10 706 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 ADAM29Q9UKF5 820 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 ACTL7BQ9Y614 415 aa14.56□□□□□ -0.08
C9orf3-217ENST00000479161 HELZ2Q9BYK8 2649 aaKnown RBP14.56□□□□□ -0.08
C9orf3-217ENST00000479161 TCRBV16S1A1N1A0A5B0 115 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 FFAR3O14843 346 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 GPR42O15529 346 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 DNAJB6O75190 326 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 ESRRBO95718 433 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 CDH13P55290 713 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 LIM2P55344 173 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 RPS13P62277 151 aaKnown RBP14.55□□□□□ -0.08
C9orf3-217ENST00000479161 CHAF1BQ13112 559 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 ABRAXAS2Q15018 415 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 EXT1Q16394 746 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 LIPMQ5VYY2 423 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 LETMD1Q6P1Q0 360 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 ANKRD37Q7Z713 158 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 SCUBE1Q8IWY4 988 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 ARMC2Q8NEN0 867 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 TRPC4APQ8TEL6 797 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 PGM2Q96G03 612 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 CDK15Q96Q40 435 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 LMF1Q96S06 567 aa14.55□□□□□ -0.08
C9orf3-217ENST00000479161 SMC6Q96SB8 1091 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms