RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 NDC1Q9BTX1 674 aa13.72□□□□□ -0.21
USP11-207ENST00000478596 MENTQ9BUN1 341 aa13.72□□□□□ -0.21
USP11-207ENST00000478596 DRC3Q9H069 523 aa13.72□□□□□ -0.21
USP11-207ENST00000478596 KLHL25Q9H0H3 589 aa13.72□□□□□ -0.21
USP11-207ENST00000478596 SEMA4BQ9NPR2 832 aaPredicted RBP13.72□□□□□ -0.21
USP11-207ENST00000478596 C1GALT1Q9NS00 363 aa13.72□□□□□ -0.21
USP11-207ENST00000478596 INTS9Q9NV88 658 aaKnown RBP13.72□□□□□ -0.21
USP11-207ENST00000478596 IFT80Q9P2H3 777 aaPredicted RBP13.72□□□□□ -0.21
USP11-207ENST00000478596 NDOR1Q9UHB4 597 aa13.72□□□□□ -0.21
USP11-207ENST00000478596 CACNA1CQ13936 2221 aa13.72□□□□□ -0.21
USP11-207ENST00000478596 FBN1P35555 2871 aaKnown RBP13.71□□□□□ -0.21
USP11-207ENST00000478596 TAPBPO15533 448 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 KLK8O60259 260 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 TRIM13O60858 407 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 C8BP07358 591 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 BPGMP07738 259 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 SBK3P0C264 359 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 GNAZP19086 355 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 PEBP1P30086 187 aaKnown RBP13.71□□□□□ -0.21
USP11-207ENST00000478596 GRK3P35626 688 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 SLC6A12P48065 614 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 TNFSF10P50591 281 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 PRKAA2P54646 552 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 NAGLUP54802 743 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 ABATP80404 500 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 DCDP81605 110 aaKnown RBP13.71□□□□□ -0.21
USP11-207ENST00000478596 CHI3L2Q15782 390 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 SLC5A12Q1EHB4 618 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 XKR6Q5GH73 641 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 ZNF678Q5SXM1 525 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 RHBDD2Q6NTF9 364 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 LINC00696Q6ZRV3 163 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 ZCCHC23Q6ZST2 131 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 TRIM42Q8IWZ5 723 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 FAM20CQ8IXL6 584 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 OR2L3Q8NG85 312 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 PROKR1Q8TCW9 393 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 SLC5A11Q8WWX8 675 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 ARSGQ96EG1 525 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 OR2A14Q96R47 310 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 SGPP1Q9BX95 441 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 ACTR8Q9H981 624 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 CCM2LQ9NUG4 571 aaPredicted RBP13.71□□□□□ -0.21
USP11-207ENST00000478596 OXSMQ9NWU1 459 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 IRAK4Q9NWZ3 460 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 TINAGQ9UJW2 476 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 PCTPQ9UKL6 214 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 STK38LQ9Y2H1 464 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 MEMO1Q9Y316 297 aa13.71□□□□□ -0.21
USP11-207ENST00000478596 FN1P02751 2386 aaKnown RBP13.7□□□□□ -0.22
USP11-207ENST00000478596 A0A1W2PPV9 198 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 TARM1B6A8C7 271 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 BIRC5O15392 142 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 ALOX12BO75342 701 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 KLHL18O94889 574 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 HSPA4LO95757 839 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 RPS17P08708 135 aaKnown RBP13.7□□□□□ -0.22
USP11-207ENST00000478596 PVRP15151 417 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 TSPAN8P19075 237 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 MAGP20916 626 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 PRDX3P30048 256 aaKnown RBP13.7□□□□□ -0.22
USP11-207ENST00000478596 ETV4P43268 484 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 FOXL2P58012 376 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 ARG2P78540 354 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 IRF8Q02556 426 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 PCBP2Q15366 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP11-207ENST00000478596 METTL2BQ6P1Q9 378 aaKnown RBP13.7□□□□□ -0.22
USP11-207ENST00000478596 RPS27LQ71UM5 84 aaKnown RBP13.7□□□□□ -0.22
USP11-207ENST00000478596 TMEM151BQ8IW70 566 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 C19orf47Q8N9M1 422 aaKnown RBP13.7□□□□□ -0.22
USP11-207ENST00000478596 NRGNQ92686 78 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 L3HYPDHQ96EM0 354 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 NSUN5Q96P11 429 aaKnown RBP13.7□□□□□ -0.22
USP11-207ENST00000478596 DPH7Q9BTV6 452 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 CAPS2Q9BXY5 557 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 GPRC5BQ9NZH0 403 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 KLHL20Q9Y2M5 609 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 ZNF835Q9Y2P0 537 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 ASB1Q9Y576 335 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 AP1M2Q9Y6Q5 423 aa13.7□□□□□ -0.22
USP11-207ENST00000478596 SPTBP11277 2137 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 SOCS6O14544 535 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 FKBP9O95302 570 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 MLYCDO95822 493 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 OTCP00480 354 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 SERPINE1P05121 402 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 IMPDH1P20839 514 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 BGNP21810 368 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 GGT5P36269 586 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 CCR8P51685 355 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 SLC18A1P54219 525 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 CDH13P55290 713 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 DNAJB13P59910 316 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 NAA20P61599 178 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 MPP2Q14168 576 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 PCOLCEQ15113 449 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 PAGE2BQ5JRK9 111 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 ATG16L1Q676U5 607 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 TTC19Q6DKK2 380 aaPredicted RBP13.69□□□□□ -0.22
USP11-207ENST00000478596 Q6ZPB1 254 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms