RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 NEK11Q8NG66 645 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 CHURC1Q8WUH1 139 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 PRCCQ92733 491 aaPredicted RBP3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 RBM41Q96IZ5 413 aaKnown RBP3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 EGLN1Q9GZT9 426 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 MINDY3Q9H8M7 445 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 MTHFD2LQ9H903 347 aaPredicted RBP3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 IARS2Q9NSE4 1012 aaKnown RBP3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 EXOC1Q9NV70 894 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 SEPT10Q9P0V9 454 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 LNPEPQ9UIQ6 1025 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 FBXL4Q9UKA2 621 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 PILRBQ9UKJ0 227 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 COLEC10Q9Y6Z7 277 aa3.33□□□□□ -1.88
SMARCA1-204ENST00000478420 CLRN2A0PK11 232 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 MEX3AA1L020 520 aaKnown RBP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 SYCE3A1L190 88 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 ANTXRLA6NF34 631 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 ZSCAN5CA6NGD5 496 aaPredicted RBP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 A8MVM7 634 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 E5RGE8 158 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 NPIPA3F8WFD2 350 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 H3BMM5 538 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 AP3B1O00203 1094 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 IFIT3O14879 490 aaKnown RBP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 MCF2LO15068 1137 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 SURF4O15260 269 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 SAP30O75446 220 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 OPN1MWP04001 364 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 CCDC159P0C7I6 412 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 OPN1MW2P0DN77 364 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 OPN1MW3P0DN78 364 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 GHRP10912 638 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 TIA1P31483 386 aaKnown RBP eCLIP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 TNNT2P45379 298 aaPredicted RBP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 KHKP50053 298 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 TMEM50BP56557 158 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 OR1D5P58170 312 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 STX1BP61266 288 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 TEFQ10587 303 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 COX10Q12887 443 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 INAQ16352 499 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 DUSP5Q16690 384 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 MOGAT2Q3SYC2 334 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 CCDC183Q5T5S1 534 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 ATP1A1-AS1Q5TC04 95 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 FAM46CQ5VWP2 391 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 DOK6Q6PKX4 331 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 KCTD9Q7L273 389 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 KLHL7Q8IXQ5 586 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 MAPK1IP1LQ8NDC0 245 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 SLC13A3Q8WWT9 602 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 DNASE1L2Q92874 299 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 NXPE2Q96DL1 559 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 MRPL38Q96DV4 380 aaKnown RBP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 OMA1Q96E52 524 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 FAM218AQ96MZ4 157 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 NEDD4LQ96PU5 975 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 PARK7Q99497 189 aaKnown RBP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 TXN2Q99757 166 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 VGLL1Q99990 258 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 ALKBH7Q9BT30 221 aaPredicted RBP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 CABLES2Q9BTV7 478 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 UTP14AQ9BVJ6 771 aaKnown RBP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 NACAP1Q9BZK3 213 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 TMEM206Q9H813 350 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 C10orf88Q9H8K7 445 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 RPF1Q9H9Y2 349 aaKnown RBP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 SLC35D1Q9NTN3 355 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 AATFQ9NY61 560 aaKnown RBP eCLIP3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 NUDT4Q9NZJ9 180 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 THEGQ9P2T0 379 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 POLKQ9UBT6 870 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 ITGA11Q9UKX5 1188 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 SMC3Q9UQE7 1217 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 NSG2Q9Y328 171 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 KIF3AQ9Y496 699 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 WIPI2Q9Y4P8 454 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 TEX264Q9Y6I9 313 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 CLCA3PQ9Y6N3 262 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 KDRP35968 1356 aa3.32□□□□□ -1.88
SMARCA1-204ENST00000478420 LOC105371242A0A075B767 164 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 A0A087WZ39 114 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 ERICH4A6NGS2 130 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 SLC9B1P1A6NJY1 282 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 E9PQ18 207 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 SLC33A1O00400 549 aaPredicted RBP3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 IDH3BO43837 385 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 SELENOFO60613 162 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 AKAP3O75969 853 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 PTBP3O95758 552 aaKnown RBP3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 TBX6O95947 436 aaPredicted RBP3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 RLN1P04808 185 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 ANKRD34CP0C6C1 535 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 SP9P0CG40 484 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 UROSP10746 265 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 GZMAP12544 262 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 OR3A3P47888 321 aa3.31□□□□□ -1.88
SMARCA1-204ENST00000478420 IFNAR2P48551 515 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms