RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 CA13Q8N1Q1 262 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 FCRL1Q96LA6 429 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 NPLQ9BXD5 320 aaPredicted RBP18.86■□□□□ 0.61
ACTB-210ENST00000477812 NUF2Q9BZD4 464 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 PRM3Q9NNZ6 103 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 KCMF1Q9P0J7 381 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 HCN3Q9P1Z3 774 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 CROTQ9UKG9 612 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 ACACAQ13085 2346 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 VSTM2BA6NLU5 285 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 SLCO1B7G3V0H7 640 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 CHST10O43529 356 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 RGS14O43566 566 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 B3GALT2O43825 422 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 ALBP02768 609 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 CCNYL3P0C7X3 344 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 PRR35P0CG20 571 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 ALOX15P16050 662 aaPredicted RBP18.85■□□□□ 0.61
ACTB-210ENST00000477812 HK2P52789 917 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 GYS2P54840 703 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 IMPG1Q17R60 797 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 SPIN4Q56A73 249 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 UNQ6494/PRO21346Q6UXR6 183 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 MED25Q71SY5 747 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 TMEM151BQ8IW70 566 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 ZC3H7AQ8IWR0 971 aaKnown RBP18.85■□□□□ 0.61
ACTB-210ENST00000477812 OR51Q1Q8NH59 317 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 COL26A1Q96A83 441 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 METTL2AQ96IZ6 378 aaKnown RBP18.85■□□□□ 0.61
ACTB-210ENST00000477812 TGIF2Q9GZN2 237 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 COPS7BQ9H9Q2 264 aaPredicted RBP18.85■□□□□ 0.61
ACTB-210ENST00000477812 MEAF6Q9HAF1 191 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 LYRM4Q9HD34 91 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 AHSPQ9NZD4 102 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 IFT80Q9P2H3 777 aaPredicted RBP18.85■□□□□ 0.61
ACTB-210ENST00000477812 VTI1BQ9UEU0 232 aa18.85■□□□□ 0.61
ACTB-210ENST00000477812 LOC101059948A0A1B0GTJ6 334 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 ATP6AP2A0A1C7CYW4 349 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 C21orf140B9A014 251 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 ATP6AP2O75787 350 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 KLK1P06870 262 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 RAB40ALP0C0E4 278 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 KITP10721 976 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 PIM1P11309 404 aaPredicted RBP18.84■□□□□ 0.61
ACTB-210ENST00000477812 F8A1P23610 371 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 LIM2P55344 173 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 ACSM2AQ08AH3 577 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 NR6A1Q15406 480 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 NKG7Q16617 165 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 SPDYAQ5MJ70 313 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 ACSM2BQ68CK6 577 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 ZNF317Q96PQ6 595 aaPredicted RBP18.84■□□□□ 0.61
ACTB-210ENST00000477812 SPSB2Q99619 263 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 FAM117AQ9C073 453 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 WDR54Q9H977 334 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 LRTM1Q9HBL6 345 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 MKKSQ9NPJ1 570 aaPredicted RBP18.84■□□□□ 0.61
ACTB-210ENST00000477812 C1orf109Q9NX04 203 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 TRPC4Q9UBN4 977 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 GIMAP2Q9UG22 337 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 DAPP1Q9UN19 280 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 SSUH2Q9Y2M2 353 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 ASB4Q9Y574 426 aa18.84■□□□□ 0.61
ACTB-210ENST00000477812 C9J4A7 227 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 SDHDO14521 159 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 KLF7O75840 302 aaPredicted RBP18.83■□□□□ 0.6
ACTB-210ENST00000477812 GBAP04062 536 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 TIA1P31483 386 aaKnown RBP eCLIP18.83■□□□□ 0.64e-28■■■□□ 15.7
ACTB-210ENST00000477812 EFNA3P52797 238 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 HNRNPH2P55795 449 aaKnown RBP18.83■□□□□ 0.6
ACTB-210ENST00000477812 FOXL2P58012 376 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 DNASE1L3Q13609 305 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 RFTN2Q52LD8 501 aaPredicted RBP18.83■□□□□ 0.6
ACTB-210ENST00000477812 PAGE2Q7Z2X7 111 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 ZNF248Q8NDW4 579 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 MAELQ96JY0 434 aaKnown RBP18.83■□□□□ 0.6
ACTB-210ENST00000477812 MAPKAP1Q9BPZ7 522 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 PFDN4Q9NQP4 134 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 LANCL2Q9NS86 450 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 ZNF282Q9UDV7 671 aaPredicted RBP18.83■□□□□ 0.6
ACTB-210ENST00000477812 PCDHGA6Q9Y5G7 932 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 USH1CQ9Y6N9 552 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 DMXL2Q8TDJ6 3036 aa18.83■□□□□ 0.6
ACTB-210ENST00000477812 CYR61O00622 381 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 BMP10O95393 424 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 ATXN8OSP0DMR3 200 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 TCN2P20062 427 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 DLSTP36957 453 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 XCR1P46094 333 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 SRSF6Q13247 344 aaKnown RBP18.82■□□□□ 0.6
ACTB-210ENST00000477812 SLAMF1Q13291 335 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 VWA2Q5GFL6 755 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 VWA5B1Q5TIE3 1220 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 IL22RA1Q8N6P7 574 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 ENDOVQ8N8Q3 282 aaKnown RBP18.82■□□□□ 0.6
ACTB-210ENST00000477812 STT3BQ8TCJ2 826 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 TBC1D20Q96BZ9 403 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 PEX11GQ96HA9 241 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 PPP1R36Q96LQ0 422 aa18.82■□□□□ 0.6
ACTB-210ENST00000477812 PPP3R2Q96LZ3 170 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms