RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MGARPQ8TDB4 240 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 NACC2Q96BF6 587 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 WDR34Q96EX3 536 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 IMMP1LQ96LU5 166 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 NSUN5Q96P11 429 aaKnown RBP16.62■□□□□ 0.25
PTPN7-209ENST00000477554 F2RL3Q96RI0 385 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 PAIP2Q9BPZ3 127 aaKnown RBP16.62■□□□□ 0.25
PTPN7-209ENST00000477554 ZNF700Q9H0M5 742 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 CPAMD8Q8IZJ3 1885 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 A0A1B0GTL3 188 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 TGFBR3LH3BV60 316 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 RTCAO00442 366 aaKnown RBP16.61■□□□□ 0.25
PTPN7-209ENST00000477554 BIRC5O15392 142 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 ERI3O43414 337 aaKnown RBP16.61■□□□□ 0.25
PTPN7-209ENST00000477554 KLK8O60259 260 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 MAN1A2O60476 641 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 DHRS4L1P0CG22 281 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 MAOAP21397 527 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 ATP5F1P24539 256 aaPredicted RBP16.61■□□□□ 0.25
PTPN7-209ENST00000477554 UQCRFS1P47985 274 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 PLA2G16P53816 162 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 IRF8Q02556 426 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 ASPHQ12797 758 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 SETDB1Q15047 1291 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 ZYG11AQ6WRX3 759 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 LRRC70Q7Z2Q7 622 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 CUZD1Q86UP6 607 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 TRPV3Q8NET8 790 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 DYDC1Q8WWB3 177 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 MIB2Q96AX9 1013 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 PTCD3Q96EY7 689 aaKnown RBP16.61■□□□□ 0.25
PTPN7-209ENST00000477554 QRFPRQ96P65 431 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 SORBS1Q9BX66 1292 aaKnown RBP16.61■□□□□ 0.25
PTPN7-209ENST00000477554 LHPPQ9H008 270 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 PLA2G3Q9NZ20 509 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 PTGFRNQ9P2B2 879 aa16.61■□□□□ 0.25
PTPN7-209ENST00000477554 MYOCOSA0A1B0GUC4 107 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 TTLL8A6PVC2 850 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 G3V2L1 256 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 K7EPI3 171 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 SAP18O00422 153 aaKnown RBP16.6■□□□□ 0.25
PTPN7-209ENST00000477554 BPGMP07738 259 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 FHP07954 510 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 GFAPP14136 432 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 SERPINB4P48594 390 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 PRKAA2P54646 552 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 WDR4P57081 412 aaKnown RBP16.6■□□□□ 0.25
PTPN7-209ENST00000477554 SRSF11Q05519 484 aaKnown RBP16.6■□□□□ 0.25
PTPN7-209ENST00000477554 E2F2Q14209 437 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 ABRAXAS2Q15018 415 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 FCRLBQ6BAA4 426 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 ZNF793Q6ZN11 406 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 CPEB2Q7Z5Q1 589 aaKnown RBP16.6■□□□□ 0.25
PTPN7-209ENST00000477554 PHF21BQ96EK2 531 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 CDK15Q96Q40 435 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 CSF3RQ99062 836 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 NECTIN3Q9NQS3 549 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 OPTCQ9UBM4 332 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 NTNG1Q9Y2I2 539 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 CLDN16Q9Y5I7 305 aa16.6■□□□□ 0.25
PTPN7-209ENST00000477554 PPP6CO00743 305 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 DLX3O60479 287 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 DPM1O60762 260 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 H2AFYO75367 372 aaKnown RBP16.59■□□□□ 0.25
PTPN7-209ENST00000477554 NEFHP12036 1026 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 CXCR2P25025 360 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 CERS1P27544 350 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 PPP2R1BP30154 601 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 SOX11P35716 441 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 PIK3CGP48736 1102 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 ALDH18A1P54886 795 aaKnown RBP16.59■□□□□ 0.25
PTPN7-209ENST00000477554 SRSF1Q07955 248 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTPN7-209ENST00000477554 PCLAFQ15004 111 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 ADPRMQ3LIE5 342 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 SFT2D3Q587I9 215 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 IGFL3Q6UXB1 125 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 ABHD13Q7L211 337 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 GOLGA7Q7Z5G4 137 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 NUDCD3Q8IVD9 361 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 KRT78Q8N1N4 520 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 TBC1D19Q8N5T2 526 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 PTGR2Q8N8N7 351 aaPredicted RBP16.59■□□□□ 0.25
PTPN7-209ENST00000477554 ZNF473Q8WTR7 871 aaKnown RBP16.59■□□□□ 0.25
PTPN7-209ENST00000477554 TBC1D20Q96BZ9 403 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 NPAS2Q99743 824 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 EHD1Q9H4M9 534 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 NT5DC2Q9H857 520 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 OXSMQ9NWU1 459 aa16.59■□□□□ 0.25
PTPN7-209ENST00000477554 CNTRLQ7Z7A1 2325 aa16.58■□□□□ 0.25
PTPN7-209ENST00000477554 A8MT66 165 aa16.58■□□□□ 0.24
PTPN7-209ENST00000477554 E2F3O00716 465 aa16.58■□□□□ 0.24
PTPN7-209ENST00000477554 OR7A17O14581 309 aa16.58■□□□□ 0.24
PTPN7-209ENST00000477554 CLEC3AO75596 197 aa16.58■□□□□ 0.24
PTPN7-209ENST00000477554 TGFB1P01137 390 aa16.58■□□□□ 0.24
PTPN7-209ENST00000477554 PCNAP12004 261 aa16.58■□□□□ 0.24
PTPN7-209ENST00000477554 EEF1DP29692 281 aaKnown RBP16.58■□□□□ 0.24
PTPN7-209ENST00000477554 ALDH3A1P30838 453 aa16.58■□□□□ 0.24
PTPN7-209ENST00000477554 CASP2P42575 452 aa16.58■□□□□ 0.24
PTPN7-209ENST00000477554 AGAP7PQ5VUJ5 663 aa16.58■□□□□ 0.24
PTPN7-209ENST00000477554 LIPMQ5VYY2 423 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms