RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 GTF2H1P32780 548 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 GCLMP48507 274 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 NRIP1P48552 1158 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 ZNF75DP51815 510 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 YWHAEP62258 255 aaKnown RBP3.63□□□□□ -1.83
UBR3-209ENST00000477461 RBP5P82980 135 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 GPNMBQ14956 572 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 NR1D2Q14995 579 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 EXOC3L4Q17RC7 722 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 DUOXA1Q1HG43 343 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 GLRA4Q5JXX5 417 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 SPOUT1Q5T280 376 aaKnown RBP3.63□□□□□ -1.83
UBR3-209ENST00000477461 DHRS7BQ6IAN0 325 aaPredicted RBP3.63□□□□□ -1.83
UBR3-209ENST00000477461 LINGO4Q6UY18 593 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 GBP6Q6ZN66 633 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 LONP2Q86WA8 852 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 GPALPP1Q8IXQ4 340 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 SPAG16Q8N0X2 631 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 LRRC43Q8N309 656 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 C17orf53Q8N3J3 647 aaPredicted RBP3.63□□□□□ -1.83
UBR3-209ENST00000477461 FBXL13Q8NEE6 735 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 NEK11Q8NG66 645 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 SLC35C1Q96A29 364 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 SLC22A18Q96BI1 424 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 ZNF560Q96MR9 790 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 VGLL1Q99990 258 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 SLX1AQ9BQ83 275 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 XPO4Q9C0E2 1151 aaKnown RBP3.63□□□□□ -1.83
UBR3-209ENST00000477461 MTMR12Q9C0I1 747 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 DNAI2Q9GZS0 605 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 TMEM117Q9H0C3 514 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 WDR13Q9H1Z4 485 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 RPS10P5Q9NQ39 176 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 DPP3Q9NY33 737 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 GCNT4Q9P109 453 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 ACAD8Q9UKU7 415 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 NME7Q9Y5B8 376 aa3.63□□□□□ -1.83
UBR3-209ENST00000477461 ARHGEF37A1IGU5 675 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 GTPBP10A4D1E9 387 aaKnown RBP3.62□□□□□ -1.83
UBR3-209ENST00000477461 CASTOR2A6NHX0 329 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 GLOD5A6NK44 160 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 PRR32B1ATL7 298 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 PLK4O00444 970 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 ADAMDEC1O15204 470 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 TRAPPC3O43617 180 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 GPR137BO60478 399 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 CREG1O75629 220 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 GJB3O75712 270 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 BMP10O95393 424 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 ADCY5O95622 1261 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 PTMAP06454 111 aaKnown RBP3.62□□□□□ -1.83
UBR3-209ENST00000477461 TPOP07202 933 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 NMBRP28336 390 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 RPL9P32969 192 aaKnown RBP3.62□□□□□ -1.83
UBR3-209ENST00000477461 OR1G1P47890 313 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 MMP15P51511 669 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 CD81P60033 236 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 TNNC1P63316 161 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 DEFB103AP81534 67 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 BTG3Q14201 252 aaPredicted RBP3.62□□□□□ -1.83
UBR3-209ENST00000477461 MELKQ14680 651 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 SYCP1Q15431 976 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 DLG2Q15700 870 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 SGSM1Q2NKQ1 1148 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 ZNF699Q32M78 642 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 KIAA1644Q3SXP7 199 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 XKR4Q5GH76 650 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 CLLU1OSQ5K130 101 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 SUSD1Q6UWL2 747 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 ALKAL1Q6UXT8 129 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 KBTBD6Q86V97 674 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 EFCAB13Q8IY85 973 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 LYG1Q8N1E2 194 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 ZNF397Q8NF99 534 aaPredicted RBP3.62□□□□□ -1.83
UBR3-209ENST00000477461 OR5B17Q8NGF7 314 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 PHOSPHO2Q8TCD6 241 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 TAF4BQ92750 862 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 TOP1MTQ969P6 601 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 JAKMIP2Q96AA8 810 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 C18orf25Q96B23 403 aaPredicted RBP3.62□□□□□ -1.83
UBR3-209ENST00000477461 HPDLQ96IR7 371 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 POM121L2Q96KW2 1035 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 FAM81BQ96LP2 452 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 NAP1L5Q96NT1 182 aaPredicted RBP3.62□□□□□ -1.83
UBR3-209ENST00000477461 SPAG5Q96R06 1193 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 ERGIC2Q96RQ1 377 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 OPRPNQ99935 248 aaPredicted RBP3.62□□□□□ -1.83
UBR3-209ENST00000477461 CRACR2AQ9BSW2 395 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 NUP58Q9BVL2 599 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 HSD3B7Q9H2F3 369 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 ZBTB20Q9HC78 741 aaPredicted RBP3.62□□□□□ -1.83
UBR3-209ENST00000477461 TBC1D13Q9NVG8 400 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 RAB20Q9NX57 234 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 TUBGCP4Q9UGJ1 667 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 ITGA11Q9UKX5 1188 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 PCDHGA5Q9Y5G8 931 aa3.62□□□□□ -1.83
UBR3-209ENST00000477461 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.62□□□□□ -1.83
UBR3-209ENST00000477461 SCN1AP35498 2009 aa3.61□□□□□ -1.83
UBR3-209ENST00000477461 NLRC5Q86WI3 1866 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms