RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 OR8J2Q8NGG1 315 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 OR8K5Q8NH50 307 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 EXD1Q8NHP7 514 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 EXOC6Q8TAG9 804 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 ATP8B4Q8TF62 1192 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 AFG1LQ8WV93 481 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 DNAJA4Q8WW22 397 aaPredicted RBP2.34□□□□□ -2.03
XRN1-211ENST00000477237 CAPSLQ8WWF8 208 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 TMEM190Q8WZ59 177 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 PRCCQ92733 491 aaPredicted RBP2.34□□□□□ -2.03
XRN1-211ENST00000477237 TNFRSF14Q92956 283 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 TAAR8Q969N4 342 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 VPS33AQ96AX1 596 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 RMND5BQ96G75 393 aaPredicted RBP2.34□□□□□ -2.03
XRN1-211ENST00000477237 ELMO2Q96JJ3 720 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 POM121L2Q96KW2 1035 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 GBP5Q96PP8 586 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 TRNT1Q96Q11 434 aaKnown RBP2.34□□□□□ -2.03
XRN1-211ENST00000477237 PCYT2Q99447 389 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 MXRA8Q9BRK3 442 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 CABLES2Q9BTV7 478 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 ZSCAN5AQ9BUG6 496 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 POTEKPQ9BYX7 375 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 YIPF3Q9GZM5 350 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 RAB33BQ9H082 229 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 LRMDAQ9H2I8 198 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 OR51B5Q9H339 312 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 RIBC2Q9H4K1 309 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 SH2D4AQ9H788 454 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 TDRD3Q9H7E2 651 aaKnown RBP2.34□□□□□ -2.03
XRN1-211ENST00000477237 LRRC40Q9H9A6 602 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 SLC38A10Q9HBR0 1119 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 IL1RAPL2Q9NP60 686 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 MRPS30Q9NP92 439 aaKnown RBP2.34□□□□□ -2.03
XRN1-211ENST00000477237 EIF2B3Q9NR50 452 aaKnown RBP2.34□□□□□ -2.03
XRN1-211ENST00000477237 AGPAT5Q9NUQ2 364 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 KLHL28Q9NXS3 571 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 PSMC3IPQ9P2W1 217 aaPredicted RBP2.34□□□□□ -2.03
XRN1-211ENST00000477237 DNAJB4Q9UDY4 337 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 CACNG5Q9UF02 275 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 KCNN3Q9UGI6 736 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 DCDC2Q9UHG0 476 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 CYB5R1Q9UHQ9 305 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 ENOPH1Q9UHY7 261 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 PRO0461Q9UI25 63 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 CNOT7Q9UIV1 285 aaKnown RBP2.34□□□□□ -2.03
XRN1-211ENST00000477237 ANAPC2Q9UJX6 822 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 GMEB2Q9UKD1 530 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 ZNF215Q9UL58 517 aaPredicted RBP2.34□□□□□ -2.03
XRN1-211ENST00000477237 TP53TG3Q9ULZ0 132 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 GINS2Q9Y248 185 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 AP3M1Q9Y2T2 418 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 LOXL2Q9Y4K0 774 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 LRRC42Q9Y546 428 aa2.34□□□□□ -2.03
XRN1-211ENST00000477237 CDHR2Q9BYE9 1310 aa2.34□□□□□ -2.04
XRN1-211ENST00000477237 MTUS2Q5JR59 1369 aa2.34□□□□□ -2.04
XRN1-211ENST00000477237 KANSL1LA0AUZ9 987 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FAM47DPA6NHR8 397 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 CBY3A6NI87 242 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SYCE1LA8MT33 242 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PTGES3LE9PB15 166 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FAM86B1E9PN63 330 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 E9PQ18 207 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 H0YJX3 145 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PSMD11O00231 422 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PGRMC1O00264 195 aaKnown RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 HIP1O00291 1037 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 LAD1O00515 517 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 TSPAN4O14817 238 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 BET1O15155 118 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 EIF3DO15371 548 aaKnown RBP eCLIP2.33□□□□□ -2.04
XRN1-211ENST00000477237 KCNN4O15554 427 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SEC14L5O43304 696 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MED7O43513 233 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PI15O43692 258 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 KLK8O60259 260 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 ATP9AO75110 1047 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 GPC4O75487 556 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 JRKO75564 520 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PRDM1O75626 825 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SERPINB7O75635 380 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MFN2O95140 757 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PGLSO95336 258 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 C22orf31O95567 290 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PDGFBP01127 241 aaPredicted RBP2.33□□□□□ -2.04
XRN1-211ENST00000477237 IGHEP01854 428 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 FHP07954 510 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 CHRM4P08173 479 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 KRT7P08729 469 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 TFPTP0C1Z6 253 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 COX5BP10606 129 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 RALBP11234 206 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 MLNP12872 115 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 ETFAP13804 333 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 CPA3P15088 417 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 GIFP27352 417 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 PDHA2P29803 388 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 BDKRB2P30411 391 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 HOXA9P31269 272 aa2.33□□□□□ -2.04
XRN1-211ENST00000477237 SHMT1P34896 483 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms