RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CTSL3PQ5NE16 218 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 UBE2R2Q712K3 238 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-214ENST00000477152 C17orf64Q86WR6 236 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 CILP2Q8IUL8 1156 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 TRIM58Q8NG06 486 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 OR51Q1Q8NH59 317 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 PSMF1Q92530 271 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 TMEM125Q96AQ2 219 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 BIRC8Q96P09 236 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 OR1F2PQ96R84 312 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 JMJD8Q96S16 334 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 CYTH2Q99418 400 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 FAM167BQ9BTA0 163 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 SYBUQ9NX95 663 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 COQ3Q9NZJ6 369 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 DHRS7Q9Y394 339 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 SCN2AQ99250 2005 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 COL12A1Q99715 3063 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 UNC79Q9P2D8 2635 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 POLEQ07864 2286 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 TEX15Q9BXT5 2789 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 CROCCQ5TZA2 2017 aa6.84□□□□□ -1.31
BRCA1-214ENST00000477152 FCHO1O14526 889 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 PRRG2O14669 202 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 SLC16A5O15375 505 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 SLC19A2O60779 497 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 TSPAN12O95859 305 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 SLC16A8O95907 504 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 ITGAMP11215 1152 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 ETS1P14921 441 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 ABOP16442 354 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 HPDP32754 393 aaPredicted RBP6.84□□□□□ -1.32
BRCA1-214ENST00000477152 CRADDP78560 199 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 OC90Q02509 493 aaPredicted RBP6.84□□□□□ -1.32
BRCA1-214ENST00000477152 CCSMST1Q4G0I0 132 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 ACSBG2Q5FVE4 666 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 ACER2Q5QJU3 275 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 ZNF470Q6ECI4 717 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 ASPGQ86U10 573 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 REXO1L1PQ8IX06 675 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 MYO1HQ8N1T3 1032 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 GHDCQ8N2G8 530 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 AMER3Q8N944 861 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 POGLUT1Q8NBL1 392 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 GRK7Q8WTQ7 553 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 CHTF18Q8WVB6 975 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 ITLN2Q8WWU7 325 aaPredicted RBP6.84□□□□□ -1.32
BRCA1-214ENST00000477152 ATL1Q8WXF7 558 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 CCDC120Q96HB5 630 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 IMMP1LQ96LU5 166 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 MMP25Q9NPA2 562 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 TRMT6Q9UJA5 497 aaKnown RBP6.84□□□□□ -1.32
BRCA1-214ENST00000477152 SVILO95425 2214 aa6.84□□□□□ -1.32
BRCA1-214ENST00000477152 CNTRLQ7Z7A1 2325 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 MYO9AB2RTY4 2548 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 A0A0U1RQJ8 604 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 E7ENX8 843 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 FAM227AF5H4B4 570 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 H7BY64 318 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 GFYI3L273 518 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 PSMD12O00232 456 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-214ENST00000477152 FOXS1O43638 330 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 CEP104O60308 925 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 CLDN14O95500 239 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 FGGP02679 453 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 CCDC175P0C221 793 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 POU3F2P20265 443 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-214ENST00000477152 XCR1P46094 333 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 HK2P52789 917 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 TAP2Q03519 686 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 RGS1Q08116 209 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 NSDHLQ15738 373 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.83□□□□□ -1.32
BRCA1-214ENST00000477152 TMEM211Q6ICI0 200 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 CAPN13Q6MZZ7 669 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-214ENST00000477152 H3F3CQ6NXT2 135 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 ABHD13Q7L211 337 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 PRELID2Q8N945 189 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 PLPP5Q8NEB5 264 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 C7orf57Q8NEG2 295 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.83□□□□□ -1.32
BRCA1-214ENST00000477152 ZNF480Q8WV37 535 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 SLC13A3Q8WWT9 602 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 MAP6Q96JE9 813 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 GPR137Q96N19 417 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 PRAP1Q96NZ9 151 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 TAAR6Q96RI8 345 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 DESI2Q9BSY9 194 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 UNKQ9C0B0 810 aaKnown RBP6.83□□□□□ -1.32
BRCA1-214ENST00000477152 VN1R1Q9GZP7 353 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 TAS2R13Q9NYV9 303 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 RUVBL2Q9Y230 463 aaKnown RBP6.83□□□□□ -1.32
BRCA1-214ENST00000477152 SLC22A7Q9Y694 548 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 MYO7BQ6PIF6 2116 aa6.83□□□□□ -1.32
BRCA1-214ENST00000477152 UTP20O75691 2785 aaKnown RBP6.83□□□□□ -1.32
BRCA1-214ENST00000477152 NOTCH2Q04721 2471 aa6.82□□□□□ -1.32
BRCA1-214ENST00000477152 GOLGA6L10A0A0M3HER8 536 aa6.82□□□□□ -1.32
BRCA1-214ENST00000477152 MAGEB17A8MXT2 336 aa6.82□□□□□ -1.32
BRCA1-214ENST00000477152 FOXO6A8MYZ6 492 aa6.82□□□□□ -1.32
BRCA1-214ENST00000477152 KLRC4-KLRK1H3BQV0 150 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms