RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ZSWIM3Q96MP5 696 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 FRMD6Q96NE9 622 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 SDHCQ99643 169 aaPredicted RBP6.59□□□□□ -1.35
UBR4-212ENST00000475973 DGCR6LQ9BY27 220 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 CLPBQ9H078 707 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 RNF38Q9H0F5 515 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 EHD1Q9H4M9 534 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 TMEM38AQ9H6F2 299 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 BRF2Q9HAW0 419 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 ZFYVE1Q9HBF4 777 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 BPIFA1Q9NP55 256 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 PRMT8Q9NR22 394 aaPredicted RBP6.59□□□□□ -1.35
UBR4-212ENST00000475973 TMEM184CQ9NVA4 438 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 GPATCH2Q9NW75 528 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 ZNF226Q9NYT6 803 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 GPRC5BQ9NZH0 403 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 CNOT2Q9NZN8 540 aaKnown RBP6.59□□□□□ -1.35
UBR4-212ENST00000475973 KLQ9UEF7 1012 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.59□□□□□ -1.35
UBR4-212ENST00000475973 KLHL3Q9UH77 587 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 ATP6V1HQ9UI12 483 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 VPS51Q9UID3 782 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 DAPK2Q9UIK4 370 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 GMEB2Q9UKD1 530 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 RAB23Q9ULC3 237 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 SNX6Q9UNH7 406 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 EXO1Q9UQ84 846 aaKnown RBP6.59□□□□□ -1.35
UBR4-212ENST00000475973 RNF6Q9Y252 685 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 TSC22D4Q9Y3Q8 395 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 DYRK1BQ9Y463 629 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 GMPPBQ9Y5P6 360 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 V9GYQ6 96 aa6.59□□□□□ -1.35
UBR4-212ENST00000475973 PLXNB3Q9ULL4 1909 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 ZDBF2Q9HCK1 2354 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 GLYATL1P3A0A0U1RQE8 302 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 SH3D21A4FU49 640 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 PRAMEF25A6NGN4 478 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 PTGES3LE9PB15 166 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 M0R3G1 203 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 HAT1O14929 419 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 NPC1O15118 1278 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 KLHL18O94889 574 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 SLCO2B1O94956 709 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 PRAMEF1O95521 474 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 B3GALT4O96024 378 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 FABP3P05413 133 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 HMBSP08397 361 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 GAAP10253 952 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 CD36P16671 472 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 DDX5P17844 614 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 CD22P20273 847 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 IDSP22304 550 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 CBLP22681 906 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 GRNP28799 593 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 CORO1AP31146 461 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 FMO3P31513 532 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 GRK5P34947 590 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 SPAM1P38567 509 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 PIK3CBP42338 1070 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 KIR3DL1P43629 444 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 ID4P47928 161 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 PCBP3P57721 371 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 PFN3P60673 137 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 VBP1P61758 197 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 SELENOWP63302 87 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 RAE1P78406 368 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 RBBP4Q09028 425 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 ELP6Q0PNE2 266 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 PDE7AQ13946 482 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 CHRNA6Q15825 494 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 SMN1Q16637 294 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 CRB2Q5IJ48 1285 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 PAGE2BQ5JRK9 111 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 DGKKQ5KSL6 1271 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 C10orf62Q5T681 223 aaPredicted RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 ZDHHC20Q5W0Z9 365 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 FRG2Q64ET8 278 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 PTRHD1Q6GMV3 140 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 ZNF770Q6IQ21 691 aaPredicted RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 DOK6Q6PKX4 331 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 GDPGP1Q6ZNW5 385 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 TPGS1Q6ZTW0 290 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 USP43Q70EL4 1123 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 GAREM2Q75VX8 874 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 SLC22A16Q86VW1 577 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 CCDC103Q8IW40 242 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 ADGRG2Q8IZP9 1017 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 C1orf52Q8N6N3 182 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 CELF5Q8N6W0 485 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 FBXO15Q8NCQ5 510 aaPredicted RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 IL17RDQ8NFM7 739 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 PSMA8Q8TAA3 256 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 ATL1Q8WXF7 558 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 NELL1Q92832 810 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 RPL3LQ92901 407 aaKnown RBP6.58□□□□□ -1.36
UBR4-212ENST00000475973 EXOC2Q96KP1 924 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 EGLN2Q96KS0 407 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 DHRS1Q96LJ7 313 aa6.58□□□□□ -1.36
UBR4-212ENST00000475973 WDFY2Q96P53 400 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms