RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 NARFLQ9H6Q4 476 aa17.01■□□□□ 0.31
CCM2-207ENST00000475551 RBFOX1Q9NWB1 397 aaKnown RBP17.01■□□□□ 0.31
CCM2-207ENST00000475551 ARL15Q9NXU5 204 aa17.01■□□□□ 0.31
CCM2-207ENST00000475551 NUP50Q9UKX7 468 aa17.01■□□□□ 0.31
CCM2-207ENST00000475551 ZFP37Q9Y6Q3 630 aaPredicted RBP17.01■□□□□ 0.31
CCM2-207ENST00000475551 ARRDC5A6NEK1 342 aa17■□□□□ 0.31
CCM2-207ENST00000475551 F8W810 466 aa17■□□□□ 0.31
CCM2-207ENST00000475551 OPN1SWP03999 348 aa17■□□□□ 0.31
CCM2-207ENST00000475551 ZNF865P0CJ78 1059 aaPredicted RBP17■□□□□ 0.31
CCM2-207ENST00000475551 SNRPGP62308 76 aaKnown RBP17■□□□□ 0.31
CCM2-207ENST00000475551 SNRPD2P62316 118 aaKnown RBP17■□□□□ 0.31
CCM2-207ENST00000475551 ZXDBP98169 803 aa17■□□□□ 0.31
CCM2-207ENST00000475551 MXD1Q05195 221 aa17■□□□□ 0.31
CCM2-207ENST00000475551 HNRNPA0Q13151 305 aaKnown RBP17■□□□□ 0.31
CCM2-207ENST00000475551 PTCHD3Q3KNS1 767 aa17■□□□□ 0.31
CCM2-207ENST00000475551 KLHL17Q6TDP4 642 aa17■□□□□ 0.31
CCM2-207ENST00000475551 UBE2J2Q8N2K1 259 aa17■□□□□ 0.31
CCM2-207ENST00000475551 NANOGP1Q8N7R0 232 aa17■□□□□ 0.31
CCM2-207ENST00000475551 POLR2J2Q9GZM3 115 aaKnown RBP17■□□□□ 0.31
CCM2-207ENST00000475551 ASB8Q9H765 288 aa17■□□□□ 0.31
CCM2-207ENST00000475551 TMEM39AQ9NV64 488 aa17■□□□□ 0.31
CCM2-207ENST00000475551 NUP214P35658 2090 aaPredicted RBP17■□□□□ 0.31
CCM2-207ENST00000475551 CDK2AP1O14519 115 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 PCDH7O60245 1069 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 ZNF623O75123 536 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 GNRH1P01148 92 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 HBQ1P09105 142 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 MSL3P1P0C860 447 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 CBSLP0DN79 551 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 ACRV1P26436 265 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 CBSP35520 551 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 IRF5Q13568 498 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 PHC2Q8IXK0 858 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 PROKR2Q8NFJ6 384 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 FAM193BQ96PV7 902 aaPredicted RBP16.99■□□□□ 0.31
CCM2-207ENST00000475551 PIP5K1AQ99755 562 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 TXNL4BQ9NX01 149 aaKnown RBP16.99■□□□□ 0.31
CCM2-207ENST00000475551 HSPB11Q9Y547 144 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 OR5K3A6NET4 321 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 WWP2O00308 870 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 FZD6O60353 706 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 FAM157BP0CG42 384 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 PSKH1P11801 424 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 XCR1P46094 333 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 NFATC2Q13469 925 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 ZXDCQ2QGD7 858 aaPredicted RBP16.99■□□□□ 0.31
CCM2-207ENST00000475551 TMEM201Q5SNT2 666 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 LYPLAL1Q5VWZ2 237 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 MFSD14CQ5VZR4 134 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 MZT2BQ6NZ67 158 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 AQP11Q8NBQ7 271 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 TRPV1Q8NER1 839 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 VPS37AQ8NEZ2 397 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 HDHD5Q9BXW7 423 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 TRIM45Q9H8W5 580 aaPredicted RBP16.99■□□□□ 0.31
CCM2-207ENST00000475551 MAT2BQ9NZL9 334 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 NDRG2Q9UN36 371 aaKnown RBP16.99■□□□□ 0.31
CCM2-207ENST00000475551 CASP8AP2Q9UKL3 1982 aa16.99■□□□□ 0.31
CCM2-207ENST00000475551 TRBV5-4A0A0C4DH59 114 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 J3KTA2 159 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 PLD2O14939 933 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 SCAMP2O15127 329 aaKnown RBP16.98■□□□□ 0.31
CCM2-207ENST00000475551 C1SP09871 688 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 ATF6P18850 670 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 ITGALP20701 1170 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 SLC9A3P48764 834 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 CLDN20P56880 219 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 RRAS2P62070 204 aaPredicted RBP16.98■□□□□ 0.31
CCM2-207ENST00000475551 PURAQ00577 322 aaKnown RBP16.98■□□□□ 0.31
CCM2-207ENST00000475551 MAB21L1Q13394 359 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 GAB1Q13480 694 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 ZNF628Q5EBL2 1059 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 TOR2AQ5JU69 321 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 DGKKQ5KSL6 1271 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 TMC8Q8IU68 726 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 GRAMD2AQ8IUY3 354 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 MED18Q9BUE0 208 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCM2-207ENST00000475551 EIF3KQ9UBQ5 218 aaKnown RBP16.98■□□□□ 0.31
CCM2-207ENST00000475551 RUVBL1Q9Y265 456 aaKnown RBP16.98■□□□□ 0.31
CCM2-207ENST00000475551 UPK3BL1B0FP48 263 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 UPK3BL2E5RIL1 263 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 MEN1O00255 615 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 CBX4O00257 560 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 ACSL4O60488 711 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 GASTP01350 101 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 TRBC1P01850 177 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 SRCP12931 536 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 SLC6A12P48065 614 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 RAB25P57735 213 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 ZNF33BQ06732 778 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 HSPA14Q0VDF9 509 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 TWF1Q12792 350 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 TAF10Q12962 218 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.98■□□□□ 0.31
CCM2-207ENST00000475551 ANXA8L1Q5VT79 327 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 NPAS3Q8IXF0 933 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 C19orf18Q8NEA5 215 aa16.98■□□□□ 0.31
CCM2-207ENST00000475551 GEMIN6Q8WXD5 167 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms