RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 WDR53Q7Z5U6 358 aaPredicted RBP11.71□□□□□ -0.53
SKA3-206ENST00000475251 OR5M9Q8NGP3 310 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 EEF1AKMT1Q8WVE0 214 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 NCLNQ969V3 563 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 PDLIM2Q96JY6 352 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 FAM173AQ9BQD7 235 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 AIF1LQ9BQI0 150 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 FAM167BQ9BTA0 163 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 RHBGQ9H310 441 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 IL1RL2Q9HB29 575 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 DLL4Q9NR61 685 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 PNO1Q9NRX1 252 aaKnown RBP11.71□□□□□ -0.53
SKA3-206ENST00000475251 HOMER3Q9NSC5 361 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 DEPPQ9NTK1 212 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 C20orf96Q9NUD7 363 aaPredicted RBP11.71□□□□□ -0.53
SKA3-206ENST00000475251 Q9UFV3 132 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 ACAD8Q9UKU7 415 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 MRPS33Q9Y291 106 aaKnown RBP11.71□□□□□ -0.53
SKA3-206ENST00000475251 RPH3AQ9Y2J0 694 aaPredicted RBP11.71□□□□□ -0.53
SKA3-206ENST00000475251 PRRC2AP48634 2157 aaKnown RBP11.7□□□□□ -0.54
SKA3-206ENST00000475251 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.7□□□□□ -0.54
SKA3-206ENST00000475251 A0A088AWK7 358 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 OR2J2O76002 312 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 B3GALT4O96024 378 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 ZNF10P21506 573 aaPredicted RBP11.7□□□□□ -0.54
SKA3-206ENST00000475251 MAN2A2P49641 1150 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 DLX5P56178 289 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 HSD17B7P56937 341 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 RAB8AP61006 207 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 SIX1Q15475 284 aaPredicted RBP11.7□□□□□ -0.54
SKA3-206ENST00000475251 C1orf185Q5T7R7 199 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 IL20RBQ6UXL0 311 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 RTL4Q6ZR62 310 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 TRILQ7L0X0 811 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 CA13Q8N1Q1 262 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 TMEM132CQ8N3T6 1108 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 GOLM1Q8NBJ4 401 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 OR56A3Q8NH54 315 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 FAM222BQ8WU58 562 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 SLC5A11Q8WWX8 675 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 FAR2Q96K12 515 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 SGCZQ96LD1 299 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 NPLQ9BXD5 320 aaPredicted RBP11.7□□□□□ -0.54
SKA3-206ENST00000475251 GSX1Q9H4S2 264 aaPredicted RBP11.7□□□□□ -0.54
SKA3-206ENST00000475251 LDAHQ9H6V9 325 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 XAB2Q9HCS7 855 aaKnown RBP11.7□□□□□ -0.54
SKA3-206ENST00000475251 ADAP2Q9NPF8 381 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 MYOTQ9UBF9 498 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 FBXO5Q9UKT4 447 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 DYRK1BQ9Y463 629 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 FAM215AQ9Y5M1 114 aa11.7□□□□□ -0.54
SKA3-206ENST00000475251 ANKHD1Q8IWZ3 2542 aaKnown RBP11.69□□□□□ -0.54
SKA3-206ENST00000475251 ZCWPW2A0A1B0GU75 182 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 TCRBV7S3A2A0A539 114 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 A6NNC1 897 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 HCN1O60741 890 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 GLSO94925 669 aaPredicted RBP11.69□□□□□ -0.54
SKA3-206ENST00000475251 HAUS5O94927 633 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 SERPINA6P08185 405 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 ENO2P09104 434 aaPredicted RBP11.69□□□□□ -0.54
SKA3-206ENST00000475251 SMIM10L1P0DMW3 83 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 CNR1P21554 472 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 UQCRC1P31930 480 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 HPDP32754 393 aaPredicted RBP11.69□□□□□ -0.54
SKA3-206ENST00000475251 HNF4AP41235 474 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 MAGEA6P43360 314 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 STXBP1P61764 594 aaKnown RBP11.69□□□□□ -0.54
SKA3-206ENST00000475251 ADAM8P78325 824 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 SLC13A2Q13183 592 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 BMPR2Q13873 1038 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 SLC10A1Q14973 349 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 FLYWCH1Q4VC44 716 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 CATSPEREQ5SY80 951 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 RIPPLY2Q5TAB7 128 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 DMRTA1Q5VZB9 504 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 FBXW10Q5XX13 1052 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 PAMR1Q6UXH9 720 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 HSDL2Q6YN16 418 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 FAM47EQ6ZV65 393 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 TAOK1Q7L7X3 1001 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 CDC20BQ86Y33 519 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 SCUBE1Q8IWY4 988 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 DAZLQ92904 295 aaKnown RBP11.69□□□□□ -0.54
SKA3-206ENST00000475251 PYCR2Q96C36 320 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 LINGO1Q96FE5 620 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 SMIM10Q96HG1 83 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 LIME1Q9H400 295 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 EXO5Q9H790 373 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 PELI2Q9HAT8 420 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 PRTFDC1Q9NRG1 225 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 SACM1LQ9NTJ5 587 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 FOXD3Q9UJU5 478 aaPredicted RBP11.69□□□□□ -0.54
SKA3-206ENST00000475251 ZNF223Q9UK11 482 aaPredicted RBP11.69□□□□□ -0.54
SKA3-206ENST00000475251 PCDHGB3Q9Y5G1 929 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 CLCA3PQ9Y6N3 262 aa11.69□□□□□ -0.54
SKA3-206ENST00000475251 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
SKA3-206ENST00000475251 PINLYPA6NC86 204 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 HSPB2A8KAH6 182 aa11.68□□□□□ -0.54
SKA3-206ENST00000475251 SYT5O00445 386 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms