RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ZNF471Q9BX82 626 aaPredicted RBP10.58□□□□□ -0.72
VAPB-204ENST00000475243 TREM1Q9NP99 234 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 PTTG2Q9NZH5 202 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 NUP50Q9UKX7 468 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 PTGDR2Q9Y5Y4 395 aa10.58□□□□□ -0.72
VAPB-204ENST00000475243 FAM227AF5H4B4 570 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 H3BSA7 217 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 SNAI1O95863 264 aaPredicted RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 PDYNP01213 254 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 ZNF763Q0D2J5 394 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 GPR17Q13304 367 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 IRF5Q13568 498 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 RAB30Q15771 203 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 NATD1Q8N6N6 113 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 OR6N2Q8NGY6 317 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 TMEM80Q96HE8 168 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 PTCHD1Q96NR3 888 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 C14orf105Q9NVL8 296 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 IFT52Q9Y366 437 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 TEX13DA0A0J9YY54 714 aaPredicted RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 ELK4P28324 431 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 ARL3P36405 182 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 ARRB1P49407 418 aaPredicted RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 LMAN2Q12907 356 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 RAB39AQ14964 217 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 SGCAQ16586 387 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 SYCE2Q6PIF2 218 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 SLC22A16Q86VW1 577 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 FBXL8Q96CD0 374 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 PRTFDC1Q9NRG1 225 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 SIX4Q9UIU6 781 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 PRSS51A0A1B0GVH4 220 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 SOD2P04179 222 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 HERC3Q15034 1050 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 FIP1L1Q6UN15 594 aaKnown RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 DCAF4L2Q8NA75 395 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 GPR174Q9BXC1 333 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 RPF2Q9H7B2 306 aaKnown RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 PTGES2Q9H7Z7 377 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 SLC2A4RGQ9NR83 387 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 C19orf25Q9UFG5 118 aaPredicted RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 MON2Q7Z3U7 1717 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 A0A1B0GVI7 797 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 IGLON5A6NGN9 336 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 PLATP00750 562 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 ASGR2P07307 311 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 CKMT1AP12532 417 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 FXYD6P3P58550 94 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 C9orf43Q8TAL5 461 aaPredicted RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 CASTOR1Q8WTX7 329 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 S100A16Q96FQ6 103 aaKnown RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 SLC5A7Q9GZV3 580 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 NUDT15Q9NV35 164 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 GMEB1Q9Y692 573 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 PIK3C2AO00443 1686 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 M0R2N6 131 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 CSF2RAP15509 400 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 HOXD13P35453 343 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 LRRC69Q6ZNQ3 347 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 POGLUT1Q8NBL1 392 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 NSMAFQ92636 917 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 FCRL3Q96P31 734 aaPredicted RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 HTR3EA5X5Y0 456 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 A8MV72 311 aaPredicted RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 NARSO43776 548 aaKnown RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 PIK3CBP42338 1070 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 RBM34P42696 430 aaKnown RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 ECH1Q13011 328 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 ITPRIPL2Q3MIP1 535 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 FUZQ9BT04 418 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 FAM120CQ9NX05 1096 aaKnown RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 SH2B3Q9UQQ2 575 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 TIMM8BQ9Y5J9 83 aaPredicted RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 RFPL2O75678 378 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 SRPRAP08240 638 aaKnown RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 ADH7P40394 386 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 GNG2P59768 71 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 LRIT3Q3SXY7 679 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 CDKL4Q5MAI5 379 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 CDCA2Q69YH5 1023 aaPredicted RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 SLC37A3Q8NCC5 494 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 OR51G2Q8NGK0 314 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 OR1F2PQ96R84 312 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 LIN28AQ9H9Z2 209 aaKnown RBP10.57□□□□□ -0.72
VAPB-204ENST00000475243 FTSJ1Q9UET6 329 aa10.57□□□□□ -0.72
VAPB-204ENST00000475243 FZD9O00144 591 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 CD9P21926 228 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 EMX2Q04743 252 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 GRK1Q15835 563 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 LRRC37A5PQ49AS3 106 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 REEP3Q6NUK4 255 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 FAM180BQ6P0A1 224 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 TMEM107Q6UX40 140 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 USP53Q70EK8 1073 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 ERI1Q8IV48 349 aaKnown RBP10.56□□□□□ -0.72
VAPB-204ENST00000475243 DNAAF1Q8NEP3 725 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 THAP6Q8TBB0 222 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 ZDHHC12Q96GR4 267 aa10.56□□□□□ -0.72
VAPB-204ENST00000475243 NPY6RQ99463 290 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms