RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ITGA2P17301 1181 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 FPR1P21462 350 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 SSR2P43308 183 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 ITGA1P56199 1179 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 CYP4F2P78329 520 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 MC1RQ01726 317 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 ILF3Q12906 894 aaKnown RBP eCLIP20.73■□□□□ 0.91
CCM2-206ENST00000474617 LRRC32Q14392 662 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.73■□□□□ 0.91
CCM2-206ENST00000474617 RNF220Q5VTB9 566 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 TMEM26Q6ZUK4 368 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 PDXPQ96GD0 296 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 HSH2DQ96JZ2 352 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 PRDM9Q9NQV7 894 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 C1GALT1Q9NS00 363 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 DDX18Q9NVP1 670 aaKnown RBP20.73■□□□□ 0.91
CCM2-206ENST00000474617 KLF15Q9UIH9 416 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 PLEKHM1Q9Y4G2 1056 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 FEZF1A0PJY2 475 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 TRIM64CA6NLI5 447 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 BMP10O95393 424 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 TFAP2AP05549 437 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 CHRM5P08912 532 aaPredicted RBP20.73■□□□□ 0.91
CCM2-206ENST00000474617 ANXA11P50995 505 aaKnown RBP20.73■□□□□ 0.91
CCM2-206ENST00000474617 PCBP4P57723 403 aaKnown RBP20.73■□□□□ 0.91
CCM2-206ENST00000474617 SELENOWP63302 87 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 SLC9A5Q14940 896 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 MPEG1Q2M385 716 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 LRIT3Q3SXY7 679 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 CRB2Q5IJ48 1285 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 ALDH16A1Q8IZ83 802 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 NAGSQ8N159 534 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 ARL10Q8N8L6 244 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 OR2L5Q8NG80 312 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 CIDECQ96AQ7 238 aaPredicted RBP20.73■□□□□ 0.91
CCM2-206ENST00000474617 DGCR14Q96DF8 476 aaKnown RBP20.73■□□□□ 0.91
CCM2-206ENST00000474617 XKR8Q9H6D3 395 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 EPS8L2Q9H6S3 715 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 CAAP1Q9H8G2 361 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 ENTPD2Q9Y5L3 495 aa20.73■□□□□ 0.91
CCM2-206ENST00000474617 RANBP2P49792 3224 aaKnown RBP20.72■□□□□ 0.91
CCM2-206ENST00000474617 A6NCN8 305 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 MBTPS2O43462 519 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 SNAP29O95721 258 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 TNFP01375 233 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 NTRK1P04629 796 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 ARAFP10398 606 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 ACTR1BP42025 376 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 MANFP55145 182 aaKnown RBP20.72■□□□□ 0.91
CCM2-206ENST00000474617 CLDN2P57739 230 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 ACTR1AP61163 376 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 SCARB2Q14108 478 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 SPIDRQ14159 915 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 SAXO2Q658L1 398 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 KIAA0895LQ68EN5 471 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 BHLHB9Q6PI77 547 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 SPESP1Q6UW49 350 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 ANGPTL8Q6UXH0 198 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 SYT13Q7L8C5 426 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 ADGRF3Q8IZF5 1079 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 ADAMTS16Q8TE57 1224 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 MOAP1Q96BY2 351 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 EPYCQ99645 322 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 MYOCQ99972 504 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 DPH7Q9BTV6 452 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 GSDMCQ9BYG8 508 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 SRMSQ9H3Y6 488 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 SLC6A20Q9NP91 592 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 LHX9Q9NQ69 397 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 POT1Q9NUX5 634 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 LYARQ9NX58 379 aaKnown RBP20.72■□□□□ 0.91
CCM2-206ENST00000474617 PCDHGA4Q9Y5G9 962 aa20.72■□□□□ 0.91
CCM2-206ENST00000474617 LCMT2O60294 686 aaKnown RBP20.71■□□□□ 0.91
CCM2-206ENST00000474617 PDE9AO76083 593 aa20.71■□□□□ 0.91
CCM2-206ENST00000474617 BCL6P41182 706 aa20.71■□□□□ 0.91
CCM2-206ENST00000474617 CDK6Q00534 326 aa20.71■□□□□ 0.91
CCM2-206ENST00000474617 IER5LQ5T953 404 aa20.71■□□□□ 0.91
CCM2-206ENST00000474617 TBPL2Q6SJ96 375 aa20.71■□□□□ 0.91
CCM2-206ENST00000474617 ZNF852Q6ZMS4 543 aa20.71■□□□□ 0.91
CCM2-206ENST00000474617 UBE3DQ7Z6J8 389 aa20.71■□□□□ 0.91
CCM2-206ENST00000474617 RBM12BQ8IXT5 1001 aaKnown RBP20.71■□□□□ 0.91
CCM2-206ENST00000474617 DPH2Q9BQC3 489 aaPredicted RBP20.71■□□□□ 0.91
CCM2-206ENST00000474617 REEP1Q9H902 201 aa20.71■□□□□ 0.91
CCM2-206ENST00000474617 A4GALTQ9NPC4 353 aa20.71■□□□□ 0.91
CCM2-206ENST00000474617 SCHIP1Q9P0W5 487 aaPredicted RBP20.71■□□□□ 0.91
CCM2-206ENST00000474617 KLK4Q9Y5K2 254 aa20.71■□□□□ 0.91
CCM2-206ENST00000474617 DOCK9Q9BZ29 2069 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 KIR2DS5A0A0G2JLQ3 304 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 A0A0G2JNG1 304 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 H3BQ06 376 aaPredicted RBP20.7■□□□□ 0.9
CCM2-206ENST00000474617 KIR2DS3K7RE56 304 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 ADAMDEC1O15204 470 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 TNFSF14O43557 240 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 ZNF217O75362 1048 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 ITGAMP11215 1152 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 HIST1H1TP22492 207 aaPredicted RBP20.7■□□□□ 0.9
CCM2-206ENST00000474617 TTKP33981 857 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 SOAT1P35610 550 aa20.7■□□□□ 0.9
CCM2-206ENST00000474617 EEF1A2Q05639 463 aaKnown RBP20.7■□□□□ 0.9
CCM2-206ENST00000474617 RGS1Q08116 209 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms