RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 HIST1H1TP22492 207 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-203ENST00000474384 ATP5A1P25705 553 aaKnown RBP17.13■□□□□ 0.33
SNRPB-203ENST00000474384 HSD3B2P26439 372 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 FOLR3P41439 243 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 SSR2P43308 183 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 SLC1A6P48664 564 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 UCNP55089 124 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 TMPRSS3P57727 454 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 KLC1Q07866 573 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 BST1Q10588 318 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 CSTF3Q12996 717 aaKnown RBP17.13■□□□□ 0.33
SNRPB-203ENST00000474384 SH2D4BQ5SQS7 431 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 KANK2Q63ZY3 851 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 ZC3H7AQ8IWR0 971 aaKnown RBP17.13■□□□□ 0.33
SNRPB-203ENST00000474384 CLYBLQ8N0X4 340 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 CA13Q8N1Q1 262 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 ACOT4Q8N9L9 421 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 ZSCAN1Q8NBB4 408 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 OR2Y1Q8NGV0 311 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 NPLQ9BXD5 320 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-203ENST00000474384 ZNF717Q9BY31 904 aaPredicted RBP17.13■□□□□ 0.33
SNRPB-203ENST00000474384 MRPL1Q9BYD6 325 aaKnown RBP17.13■□□□□ 0.33
SNRPB-203ENST00000474384 TGIF2Q9GZN2 237 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 C20orf27Q9GZN8 174 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 CLK4Q9HAZ1 481 aaKnown RBP17.13■□□□□ 0.33
SNRPB-203ENST00000474384 ZDHHC2Q9UIJ5 367 aa17.13■□□□□ 0.33
SNRPB-203ENST00000474384 NXT1Q9UKK6 140 aaKnown RBP17.13■□□□□ 0.33
SNRPB-203ENST00000474384 USP24Q9UPU5 2620 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 SERTM1A2A2V5 107 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 ZNF891A8MT65 544 aaPredicted RBP17.12■□□□□ 0.33
SNRPB-203ENST00000474384 DYNC1I1O14576 645 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 EEDO75530 441 aaKnown RBP17.12■□□□□ 0.33
SNRPB-203ENST00000474384 SEMA3DO95025 777 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 UMODP07911 640 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 PRKAR1AP10644 381 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 BSGP35613 385 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 ARFIP1P53367 373 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 HMGCS1Q01581 520 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 ZNF33BQ06732 778 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 IL10RAQ13651 578 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 UGT3A2Q3SY77 523 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 ATP1A1-AS1Q5TC04 95 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 GBP7Q8N8V2 638 aaPredicted RBP17.12■□□□□ 0.33
SNRPB-203ENST00000474384 RBCK1Q9BYM8 510 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 ACPTQ9BZG2 426 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 NMRK1Q9NWW6 199 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 AHSPQ9NZD4 102 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 VPS29Q9UBQ0 182 aa17.12■□□□□ 0.33
SNRPB-203ENST00000474384 CDC14CA4D256 554 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 OR2W5A6NFC9 320 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 FAM227AF5H4B4 570 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 K7ENP7 123 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 SCELO95171 688 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 GBAP04062 536 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 FURINP09958 794 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 RNH1P13489 461 aaKnown RBP17.11■□□□□ 0.33
SNRPB-203ENST00000474384 TSFMP43897 325 aaKnown RBP17.11■□□□□ 0.33
SNRPB-203ENST00000474384 LIM2P55344 173 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 CXADRP78310 365 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 MC1RQ01726 317 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 VAC14Q08AM6 782 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 TBL3Q12788 808 aaKnown RBP17.11■□□□□ 0.33
SNRPB-203ENST00000474384 SLAMF1Q13291 335 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 HSP90B2PQ58FF3 399 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 MFSD4BQ5TF39 518 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 INO80CQ6PI98 192 aaPredicted RBP17.11■□□□□ 0.33
SNRPB-203ENST00000474384 C19orf48Q6RUI8 117 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 TRIM42Q8IWZ5 723 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 METTL4Q8N3J2 472 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 ZNF781Q8N8C0 355 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 TBC1D20Q96BZ9 403 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 CRELD1Q96HD1 420 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 SORT1Q99523 831 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 MAPKAP1Q9BPZ7 522 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 DDX31Q9H8H2 851 aaKnown RBP17.11■□□□□ 0.33
SNRPB-203ENST00000474384 MANSC1Q9H8J5 431 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 C14orf105Q9NVL8 296 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 C3orf18Q9UK00 162 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 MKL2Q9ULH7 1088 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 DNAJC15Q9Y5T4 150 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 PTGDR2Q9Y5Y4 395 aa17.11■□□□□ 0.33
SNRPB-203ENST00000474384 PSMD12O00232 456 aaPredicted RBP17.1■□□□□ 0.33
SNRPB-203ENST00000474384 B4GALT2O60909 372 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 CDC123O75794 336 aaPredicted RBP17.1■□□□□ 0.33
SNRPB-203ENST00000474384 RECKO95980 971 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 CHEK2O96017 543 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 HEXBP07686 556 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 FHP07954 510 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 NR1D1P20393 614 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 IL10P22301 178 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 OTX2P32243 289 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 EMP2P54851 167 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 BTKQ06187 659 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 SSPNQ14714 243 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 UGT8Q16880 541 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 IMPG1Q17R60 797 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 MINDY4Q4G0A6 757 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 ATG16L1Q676U5 607 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 TRIM46Q7Z4K8 759 aa17.1■□□□□ 0.33
SNRPB-203ENST00000474384 NUDT13Q86X67 352 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms