RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 SLC13A2Q13183 592 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 BIKQ13323 160 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 BMPR2Q13873 1038 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 AP5B1Q2VPB7 878 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 C10orf62Q5T681 223 aaPredicted RBP19.22■□□□□ 0.67
SNX13-206ENST00000474067 ABHD17CQ6PCB6 329 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 LAS2Q8IYD9 372 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 CENPLQ8N0S6 344 aaPredicted RBP19.22■□□□□ 0.67
SNX13-206ENST00000474067 NOA1Q8NC60 698 aaKnown RBP19.22■□□□□ 0.67
SNX13-206ENST00000474067 TSLPQ969D9 159 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 ESAMQ96AP7 390 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 C5orf34Q96MH7 638 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 PAFAH2Q99487 392 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 CCDC77Q9BR77 488 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 ACTR8Q9H981 624 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 LYRM4Q9HD34 91 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 SLC5A6Q9Y289 635 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 TSC22D4Q9Y3Q8 395 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 SMIM24O75264 130 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 PCNAP12004 261 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 HNRNPH1P31943 449 aaKnown RBP19.21■□□□□ 0.67
SNX13-206ENST00000474067 PIK3CBP42338 1070 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 CLCN2P51788 898 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 MRPL49Q13405 166 aaKnown RBP19.21■□□□□ 0.67
SNX13-206ENST00000474067 SERTAD2Q14140 314 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 PCBP2Q15366 365 aaKnown RBP eCLIP19.21■□□□□ 0.67
SNX13-206ENST00000474067 PFKFB4Q16877 469 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 EIF2S3LQ2VIR3 472 aaKnown RBP19.21■□□□□ 0.67
SNX13-206ENST00000474067 TENM4Q6N022 2769 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 TRMT10CQ7L0Y3 403 aaKnown RBP19.21■□□□□ 0.67
SNX13-206ENST00000474067 MYLK4Q86YV6 388 aaPredicted RBP19.21■□□□□ 0.67
SNX13-206ENST00000474067 TMEM132CQ8N3T6 1108 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 TEX9Q8N6V9 391 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 CATSPER1Q8NEC5 780 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 ELP5Q8TE02 316 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 PLA2G3Q9NZ20 509 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 ZNF490Q9ULM2 529 aaPredicted RBP19.21■□□□□ 0.67
SNX13-206ENST00000474067 DAPP1Q9UN19 280 aa19.21■□□□□ 0.67
SNX13-206ENST00000474067 SHANK1Q9Y566 2161 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 CPAMD8Q8IZJ3 1885 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 IGKV3D-11A0A0A0MRZ8 115 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 DYRK3O43781 588 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 ALDOAP04075 364 aaKnown RBP19.2■□□□□ 0.66
SNX13-206ENST00000474067 CELA2AP08217 269 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 PPP2R1BP30154 601 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 RAP1GDS1P52306 607 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 EFNA3P52797 238 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 OC90Q02509 493 aaPredicted RBP19.2■□□□□ 0.66
SNX13-206ENST00000474067 RBPJQ06330 500 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 DLG1Q12959 904 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.2■□□□□ 0.66
SNX13-206ENST00000474067 FBXO48Q5FWF7 155 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 LCA5Q86VQ0 697 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 RPS19BP1Q86WX3 136 aaKnown RBP19.2■□□□□ 0.66
SNX13-206ENST00000474067 CRLF3Q8IUI8 442 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 DAZLQ92904 295 aaKnown RBP19.2■□□□□ 0.66
SNX13-206ENST00000474067 ISL2Q96A47 359 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 MTBPQ96DY7 904 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 DEFB126Q9BYW3 111 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 ADAP2Q9NPF8 381 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 SCN2AQ99250 2005 aa19.2■□□□□ 0.66
SNX13-206ENST00000474067 ESPL1Q14674 2120 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 EXOC1LA0A1B0GW35 172 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 POC1B-GALNT4F8VUJ3 575 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 KLK8O60259 260 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 ABHD2P08910 425 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 GP1BBP13224 206 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 MTHFD2P13995 350 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 MAOAP21397 527 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 EEF1DP29692 281 aaKnown RBP19.19■□□□□ 0.66
SNX13-206ENST00000474067 TLX1P31314 330 aaPredicted RBP19.19■□□□□ 0.66
SNX13-206ENST00000474067 ARL1P40616 181 aaPredicted RBP19.19■□□□□ 0.66
SNX13-206ENST00000474067 SSR2P43308 183 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 STX4Q12846 297 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 ZNF766Q5HY98 468 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 SCUBE1Q8IWY4 988 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 BEST3Q8N1M1 668 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 B3GNT7Q8NFL0 401 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 OR7G3Q8NG95 312 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 ZNF473Q8WTR7 871 aaKnown RBP19.19■□□□□ 0.66
SNX13-206ENST00000474067 NR4A3Q92570 626 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 ATP6V1E2Q96A05 226 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 TMEM125Q96AQ2 219 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 RGMAQ96B86 450 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 VMP1Q96GC9 406 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 SCYL1Q96KG9 808 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 QRFPRQ96P65 431 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 SLX1AQ9BQ83 275 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 MS4A8Q9BY19 250 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 RYDENQ9NUL5 291 aaKnown RBP19.19■□□□□ 0.66
SNX13-206ENST00000474067 CPSF2Q9P2I0 782 aaKnown RBP19.19■□□□□ 0.66
SNX13-206ENST00000474067 NBASA2RRP1 2371 aa19.19■□□□□ 0.66
SNX13-206ENST00000474067 OR2W5A6NFC9 320 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 GABRR3A8MPY1 467 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 STX16-NPEPL1H3BU86 382 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 STX16O14662 325 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 CTNSO60931 367 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 B3GALT4O96024 378 aa19.18■□□□□ 0.66
SNX13-206ENST00000474067 SNRPAP09012 282 aaKnown RBP19.18■□□□□ 0.66
SNX13-206ENST00000474067 COX7A2P14406 83 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms