RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 DBX2Q6ZNG2 339 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 TREML1Q86YW5 311 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 TMEM126BQ8IUX1 230 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 DNAJB8Q8NHS0 232 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 ZFP28Q8NHY6 868 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 PROKR1Q8TCW9 393 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 UTP15Q8TED0 518 aaKnown RBP9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 KLHL6Q8WZ60 621 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 TESCQ96BS2 214 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 RCN3Q96D15 328 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 TM4SF19Q96DZ7 209 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 ITCHQ96J02 903 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 CMKLR1Q99788 373 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 YIPF2Q9BWQ6 316 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 SORBS1Q9BX66 1292 aaKnown RBP9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 KLHL31Q9H511 634 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 CLMPQ9H6B4 373 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 REEP4Q9H6H4 257 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 STARD5Q9NSY2 213 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 NAALAD2Q9Y3Q0 740 aa9.76□□□□□ -0.85
PRPF38A-202ENST00000474048 C15orf38-AP3S2A0A0A6YYH1 394 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 A0A1W2PP18 115 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 C1orf226A1L170 272 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 C9JVG2 144 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 H0YHG0 523 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 EEDO75530 441 aaKnown RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 KLHL18O94889 574 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 KCNH1O95259 989 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 PGRP06401 933 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 ALAS2P22557 587 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 PTPN4P29074 926 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 TPP2P29144 1249 aaPredicted RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 PPP2R1BP30154 601 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 EMP3P54852 163 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 RAE1P78406 368 aaKnown RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 COQ5Q5HYK3 327 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 TMEM214Q6NUQ4 689 aaKnown RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 MSANTD1Q6ZTZ1 278 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 ARPINQ7Z6K5 226 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 BPHLQ86WA6 291 aaPredicted RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 PPP1R3BQ86XI6 285 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 SAMD14Q8IZD0 417 aaPredicted RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 DSELQ8IZU8 1212 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 KRTCAP2Q8N6L1 136 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 TRIML2Q8N7C3 387 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 RCBTB1Q8NDN9 531 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 ROPN1LQ96C74 230 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 CLIP3Q96DZ5 547 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 MMABQ96EY8 250 aaPredicted RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 DEPDC7Q96QD5 511 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 OR6C1Q96RD1 312 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 BBS4Q96RK4 519 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 DUSP26Q9BV47 211 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 NPLQ9BXD5 320 aaPredicted RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 BHLHE41Q9C0J9 482 aaPredicted RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 LYRM4Q9HD34 91 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 PARD6AQ9NPB6 346 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 CUTCQ9NTM9 273 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 FAM120CQ9NX05 1096 aaKnown RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 L3MBTL1Q9Y468 752 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF780BQ9Y6R6 833 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 UNC13CQ8NB66 2214 aa9.75□□□□□ -0.85
PRPF38A-202ENST00000474048 A0A0A6YYD5 115 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 BLACEA4D250 179 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF860A6NHJ4 632 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 EFCAB7A8K855 629 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 AGRPO00253 132 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 NTN3O00634 580 aaPredicted RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 CLDN4O14493 209 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 RFXANKO14593 260 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 PDPK1O15530 556 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 GALR3O60755 368 aaPredicted RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 ERAL1O75616 437 aaKnown RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 CIB2O75838 187 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 BMP10O95393 424 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 NSA2O95478 260 aaKnown RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 NPPAP01160 153 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 MSL3P1P0C860 447 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 JMJD7P0C870 316 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 PIM1P11309 404 aaPredicted RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 RNH1P13489 461 aaKnown RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 DDCP20711 480 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 TACR1P25103 407 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 GPC1P35052 558 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 C21orf58P58505 322 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 TNFRSF17Q02223 184 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 CFHR1Q03591 330 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 HYAL2Q12891 473 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 FAM53BQ14153 422 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 TRIP6Q15654 476 aaKnown RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 PRTGQ2VWP7 1150 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 SPANXN4Q5MJ08 99 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 NDUFAF5Q5TEU4 345 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 MFSD4BQ5TF39 518 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 OR52E8Q6IFG1 317 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 TTLL10Q6ZVT0 673 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 ARHGAP22Q7Z5H3 698 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 DHDDSQ86SQ9 333 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms