RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 TSTA3Q13630 321 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-214ENST00000473778 SCARB2Q14108 478 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 DUSP7Q16829 419 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 SPIN4Q56A73 249 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 TECPR1Q7Z6L1 1165 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 CACTIN-AS1Q8N1I8 211 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 TRAM1L1Q8N609 369 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 MRGPRX3Q96LB0 322 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 DACH2Q96NX9 599 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 SPATA9Q9BWV2 254 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 KLHL25Q9H0H3 589 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 REEP4Q9H6H4 257 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF282Q9UDV7 671 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-214ENST00000473778 KIF26AQ9ULI4 1882 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-214ENST00000473778 FFAR1O14842 300 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 CCL16O15467 120 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 AP2A2O94973 939 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 C1orf105O95561 183 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 SOD1P00441 154 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 TYRP14679 529 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 ENDOUP21128 410 aaKnown RBP10.47□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF763Q0D2J5 394 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 TEAD4Q15561 434 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 ANXA8L1Q5VT79 327 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 BRAT1Q6PJG6 821 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 TMEM220Q6QAJ8 160 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 KLHDC8AQ8IYD2 350 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 PSD4Q8NDX1 1056 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 VPS37AQ8NEZ2 397 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 B3GNT7Q8NFL0 401 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 VN1R2Q8NFZ6 395 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 GLYATL1Q969I3 302 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 MAGEB10Q96LZ2 347 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-214ENST00000473778 EMILIN2Q9BXX0 1053 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 NXF2Q9GZY0 626 aaKnown RBP10.47□□□□□ -0.73
C9orf3-214ENST00000473778 PRM3Q9NNZ6 103 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 ITM2CQ9NQX7 267 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 MS4A12Q9NXJ0 267 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 ATP6V1HQ9UI12 483 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 PCDHGA3Q9Y5H0 932 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 CKAP5Q14008 2032 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 NOTOA8MTQ0 251 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 SSX4O60224 188 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 C8AP07357 584 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 HSMCR30P0CW71 290 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 PCSK2P16519 638 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 WEE1P30291 646 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 UGT2B10P36537 528 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 XCR1P46094 333 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 RGS6P49758 472 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 TAS2R50P59544 299 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 RPS26P62854 115 aaKnown RBP10.46□□□□□ -0.73
C9orf3-214ENST00000473778 POLR2LP62875 67 aaKnown RBP10.46□□□□□ -0.73
C9orf3-214ENST00000473778 PDE7AQ13946 482 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 SLBPQ14493 270 aaKnown RBP eCLIP10.46□□□□□ -0.73
C9orf3-214ENST00000473778 IRF3Q14653 427 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 PUM1Q14671 1186 aaKnown RBP eCLIP10.46□□□□□ -0.73
C9orf3-214ENST00000473778 PTGES3Q15185 160 aaKnown RBP10.46□□□□□ -0.73
C9orf3-214ENST00000473778 LEXMQ3ZCV2 418 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 IFI44LQ53G44 452 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 ARMCX4Q5H9R4 360 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 MED27Q6P2C8 311 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF605Q86T29 641 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 CYP4Z2PQ8N1L4 340 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 PARP16Q8N5Y8 322 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 MINDY2Q8NBR6 621 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 ANKK1Q8NFD2 765 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 OR52N2Q8NGI0 321 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 METTL2AQ96IZ6 378 aaKnown RBP10.46□□□□□ -0.73
C9orf3-214ENST00000473778 FAM129BQ96TA1 746 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 RAD9AQ99638 391 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 WFDC6Q9BQY6 131 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 CHCHD6Q9BRQ6 235 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 ZSCAN5AQ9BUG6 496 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 WRAP53Q9BUR4 548 aaKnown RBP10.46□□□□□ -0.73
C9orf3-214ENST00000473778 BHLHE41Q9C0J9 482 aaPredicted RBP10.46□□□□□ -0.73
C9orf3-214ENST00000473778 MMP27Q9H306 513 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 DMRT3Q9NQL9 472 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 SPG21Q9NZD8 308 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 PRELID1Q9Y255 219 aa10.46□□□□□ -0.73
C9orf3-214ENST00000473778 PCYT1BQ9Y5K3 369 aaPredicted RBP10.46□□□□□ -0.73
C9orf3-214ENST00000473778 CHD9Q3L8U1 2897 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 PIPSLA2A3N6 862 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 SPINT1O43278 529 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 ATG13O75143 517 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 TBX6O95947 436 aaPredicted RBP10.46□□□□□ -0.74
C9orf3-214ENST00000473778 GASTP01350 101 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 CATP04040 527 aaKnown RBP10.46□□□□□ -0.74
C9orf3-214ENST00000473778 IGFBP1P08833 259 aaPredicted RBP10.46□□□□□ -0.74
C9orf3-214ENST00000473778 ALOX5P09917 674 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 POLR2EP19388 210 aaKnown RBP10.46□□□□□ -0.74
C9orf3-214ENST00000473778 HOXD10P28358 340 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 LIM2P55344 173 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 PCBP3P57721 371 aaKnown RBP10.46□□□□□ -0.74
C9orf3-214ENST00000473778 CDK6Q00534 326 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 MESP2Q0VG99 397 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 RPS26P11Q5JNZ5 115 aaPredicted RBP10.46□□□□□ -0.74
C9orf3-214ENST00000473778 LY6G5CQ5SRR4 150 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 GCNT6Q5T4J0 391 aa10.46□□□□□ -0.74
C9orf3-214ENST00000473778 C10orf62Q5T681 223 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms