RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 RNASEH2BQ5TBB1 312 aaKnown RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 PXDC1Q5TGL8 231 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 C12orf60Q5U649 245 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 ARHGEF16Q5VV41 709 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 FRG2Q64ET8 278 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 RAB12Q6IQ22 244 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 MFSD12Q6NUT3 480 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 PAPD4Q6PIY7 484 aaKnown RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 METTL7BQ6UX53 244 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 LINC00696Q6ZRV3 163 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 TECPR1Q7Z6L1 1165 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 FJX1Q86VR8 437 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 COMMD2Q86X83 199 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 HSCBQ8IWL3 235 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 PEX5LQ8IYB4 626 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 CFAP206Q8IYR0 622 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 PM20D2Q8IYS1 436 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 BEST3Q8N1M1 668 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 RYBPQ8N488 228 aaPredicted RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 C1orf52Q8N6N3 182 aaKnown RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 PCDH20Q8N6Y1 951 aaKnown RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 PPFIBP2Q8ND30 876 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 RDM1Q8NG50 284 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 OR2AJ1Q8NGZ0 328 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 OR14A16Q8NHC5 309 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 NCOA7Q8NI08 942 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 TMEM163Q8TC26 289 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 ST7LQ8TDW4 575 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 TAS1R2Q8TE23 839 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 HEXDCQ8WVB3 486 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 OIT3Q8WWZ8 545 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 SYN2Q92777 582 aaPredicted RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 SEMA4DQ92854 862 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 MR1Q95460 341 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 SLC25A28Q96A46 364 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 C18orf12Q96KH6 178 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 AK8Q96MA6 479 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 OR6C1Q96RD1 312 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 HAUS8Q9BT25 410 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 CRNKL1Q9BZJ0 848 aaKnown RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 PLA2G12AQ9BZM1 189 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 LRMDAQ9H2I8 198 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 ESRP2Q9H6T0 727 aaKnown RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 TMEM206Q9H813 350 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 MINDY3Q9H8M7 445 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 AKIRIN1Q9H9L7 192 aaPredicted RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 HPS4Q9NQG7 708 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 PXMP2Q9NR77 195 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 TRNAU1APQ9NX07 287 aaKnown RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 TUBA8Q9NY65 449 aaPredicted RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 CACNG4Q9UBN1 327 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 FBXL5Q9UKA1 691 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 FZD10Q9ULW2 581 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 STX8Q9UNK0 236 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 CHKBQ9Y259 395 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 KLF2Q9Y5W3 355 aaPredicted RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 HS3ST3B1Q9Y662 390 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 NFS1Q9Y697 457 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 NUMA1Q14980 2115 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 MYH9P35579 1960 aaKnown RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 MEGF8Q7Z7M0 2845 aa2.21□□□□□ -2.06
CALD1-216ENST00000473714 TDRD6O60522 2096 aaKnown RBP2.21□□□□□ -2.06
CALD1-216ENST00000473714 CHD3Q12873 2000 aaKnown RBP2.2□□□□□ -2.06
CALD1-216ENST00000473714 MXRA5Q9NR99 2828 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 MGAM2Q2M2H8 2515 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 MYH10P35580 1976 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 ELOVL7A1L3X0 281 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 GOLGA6L9A6NEM1 432 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 CCDC69A6NI79 296 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 FAM86B1E9PN63 330 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 TRIM77I1YAP6 450 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 SOCS6O14544 535 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 PGRMC2O15173 223 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 LDB2O43679 373 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 PRKAB2O43741 272 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 ZBTB14O43829 449 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 MED24O75448 989 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 RAD51DO75771 328 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 STAM2O75886 525 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 ACSL3O95573 720 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 IFNA2P01563 188 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 FAM86B2P0C5J1 330 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 OR2T7P0C7T2 308 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 PLA2G4BP0C869 781 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 LIPCP11150 499 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 COX6B1P14854 86 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 CKMT2P17540 419 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 DESP17661 470 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 GNAZP19086 355 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 MAPK3P27361 379 aaPredicted RBP2.2□□□□□ -2.06
CALD1-216ENST00000473714 CCKARP32238 428 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 HSD17B3P37058 310 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 OR1G1P47890 313 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 KCNJ1P48048 391 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 TPD52P55327 224 aaPredicted RBP2.2□□□□□ -2.06
CALD1-216ENST00000473714 HNRNPH2P55795 449 aaKnown RBP2.2□□□□□ -2.06
CALD1-216ENST00000473714 SELENOVP59797 346 aa2.2□□□□□ -2.06
CALD1-216ENST00000473714 SEC61BP60468 96 aaKnown RBP2.2□□□□□ -2.06
CALD1-216ENST00000473714 RPS18P62269 152 aaKnown RBP2.2□□□□□ -2.06
CALD1-216ENST00000473714 SSBP2P81877 361 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms